Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2767g00001 ATGGCTAAAAACGACTTGAAGCTTTTGGGTGGTTGGTCCAGCCCTTTTTCTCTAAGGGTGCAGATTGCCCTTGACCTGAAGGGTGTAGATTATGAGGTTATTGAAGAGACCTTTAATCCCAAAAGTGAACTTCTTCTTAAATCAAATCCTGTGCACAAGAAAATCCCAGTTCTCATCCATGCAGATAAACCCATATGTGAATCTGCAATCATAGTCGAATACATCGATGAAGTTTGGACCCATGCTCCCTCCATCCTTCCACAAAATGCCTATGATCGAGCTAATGCCCGATTTTGGGTTGCTTATATCGATGACAAGTGGTTGAAGGCCTTAAGAAGTATTCTAATGGCTGAAGAGAATGATGAAGAAAGGAGGCAGAGTTTAAGGAAGCAGAAGAAGTGTTTGAGGAGGATGGAAGAAGTGATGAACAAGGGCAGTGAAGGAAAGGCTTTTTCGGAGGAGACACCATTGGATTATGTGATATTGGTTTTGGATGCTATCTGA 504 0.4226 MAKNDLKLLGGWSSPFSLRVQIALDLKGVDYEVIEETFNPKSELLLKSNPVHKKIPVLIHADKPICESAIIVEYIDEVWTHAPSILPQNAYDRANARFWVAYIDDKWLKALRSILMAEENDEERRQSLRKQKKCLRRMEEVMNKGSEGKAFSEETPLDYVILVLDAI 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2767g00001 167 SFLD Glutathione Transferase (cytosolic) 2 151 IPR040079 -
Vium2767g00001 167 SUPERFAMILY Thioredoxin-like 5 107 IPR036249 -
Vium2767g00001 167 CDD GST_N_Tau 6 79 - -
Vium2767g00001 167 Gene3D Glutaredoxin 1 85 - -
Vium2767g00001 167 Gene3D - 86 165 - -
Vium2767g00001 167 Pfam Glutathione S-transferase, N-terminal domain 6 77 IPR004045 -
Vium2767g00001 167 SFLD Main.3: Omega- and Tau-like 2 151 IPR045073 -
Vium2767g00001 167 Coils Coil 118 138 - -
Vium2767g00001 167 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Vium2767g00001 167 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 9 151 IPR045073 -
Vium2767g00001 167 SUPERFAMILY GST C-terminal domain-like 85 151 IPR036282 -
Vium2767g00001 167 FunFam Glutathione S-transferase GSTU6 1 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2767g00001 Vium-Chr2767 3028 3749 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2767g00001 1 167 Glutathione S-transferase Gene Family AT1G10360 51.786 1.19e-58 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2767g00001 K00799 - gmx:100805908 221.476