Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vium2741g00004 | ATGAGCAGCTTAAGGCCTGAACTGCATGTTGCCCAACAACTTCGGCGGGACAAATTGAGGATCCAAAACAGTTCCCAACATTTGCAAGAGTTCCCAAGCAACCTAGAACAGTTATCGTTACACCCAGGTTTCAACTTGGATCTTCTTCAAGTGAGAAATGTTCGAAATGGAAACATGCTTGACGAGGCCCTTTATTCATCGGATATGATATCTTTTTCCACTGCTTCGAATCCTTTGTCCACTCCAAGAAACCCGTTGGAGTGTCAAGAACTGATGATGGCTCAGTATGGTTCCACTTCGTTTCCTCATTCATCGTCCCCGAAGGACCAACAATGTGAACCACGCCACTTGGGAGCTAATTGGATGGTGAATTATAACGAAAGCAACCCCAACACCAACAGTACCACCTTCTTCTCTTCTGAGCTTAATAACAACGCTTCTGGTGAAATAGCCAATAGAGAAATTCAGAAGCAGTTCGGTGAAATGCATTACCCTCCTTCTTCGTCTTCTTCGCCTCCTCTTTACCATCATGCTTTGCAGGACATGTCTTACGGCGTTTGGGGAGGAAACCATGCTGAGCCTGTGCTTCATTATCATGCAAACAACGAGTTACGTTTTGGGGGTGCTAATTTATGGACAAATAGTAGCAGCGCGATGGGTTTCAAGAAGAATAATGAACAAGACATATATCCTCATCAGGGTTTATCACTGTCACTTTCCTCGAACTCACAATCTAAGCCTTGTTTTGAAGAAGGGTCTGCATCGGATGACCCTACTCAATATTCAAAGTCATTGAAGTCCTCCATGAAGTTGAACGTTCTTTCAAACAATACTGTTTATCGAAATGTTGGCCCCCTCGGTCCCTTCACCGGGTACGCCACGATTTTGAAGAGTTCAAGATTCTTGAAGCCGTGTCAACAGCTGTTAGATGAGTGGTGCTGTCAATACGGTTCAAAGTCTGCGAAAGGAGGGGGTTGTGACGTTCCAGAGTGGGTCTCTCGAGATGTCAGTGCTGCCTCTATTTCTGCAGCTGCAACTGCTGGTGATGCTCTTAATGTTGATGAAAGTGGGGGTGCTGCAAAAGGTGTTAGCTATCTGGGTGCTTCATCCTCTGTGTTGTATAGTTCAAATGAAAATGATAATACAAATAGCGCTGATGGCGGAGCCACGAGTAACTTTTGTCTTTCTTCTCGGCCAGAGTGCCAAAAGAACAAGGCAAAACTACTGTACATGCAAGAGGAGGTTCGTTTTTTCTCTGCTCAATGTAGAATAATAGTAACCCTTCTGGCCTGTTTGTGTTCCTTACTTTTTTGTCTTGTGTGTTTTTGGTATGTATGTATGGCTAATGTCTGTCAGAGGTTTTTACTGTTTTGTAACATGAAAAAAAGGCCAAATGCTTTAAAACTTCCGTGTGCAACATTAGGTCATTTGGTGTCGATTATTGTGGATGCAAAGCTCATGAAAAGTTTGCTTGTGGAAATATTTACAACAACGATATACGTTCTCAGAATGTGGGTTAAAGCGAAAATGTATATTTGTGTTGGTGTGTCGATTTGTTTTGGAATACTGTGTGCTAATAGTAGAAATGAAGACTCTGCCTATGCAAGAACAGTGTTGCTAGATAACCTTTCACCTGTGCACAGTCCGCTTTCCGAAAGTTCTTTGTTTCTTCCACAATTCCTAAACAAAGTGTTTGAGGTGTTATCCTACCCGGTTGCTATTGTTCAAATCGGAGGGTTATTAGTGGAGGTTGGAATGAGCAGCTTAAGGCCTGAACTGCATGTTGCCCAACAACTTCGGCGGGACAAATTGAGGATCCAAAACAGTTCCCAACATTTGCAAGAGTTCCCAAGCAACCTAGAACAGTTATCGTTACACCCAGGTTTCAACTTGGATCTTCTTCAAGTGAGAAATGTTCGAAATGGAAACATGCTTGACGAGGCCCTTTATTCATCGGATATGATATCTTTTTCCACTGCCTCGAATCCTTTGTCCACTCCAAGAAACCCGTTGGAGTGTCAAGAACTGATGATGGCTCAGTATGGTTCCACTTCGTTTCCTCATTCATCGTCCCCGAAGGACCAACAATGTGAACCACGCCACTTGGGAGCTAATTGGATGGTGAATTATAACGAAAGCAACCCCAACACCAACAGTACCACCTTCTTCTCTTCTGAGCTTAATAACAACGCTTCTGGTGAAATAGCCAATAGAGAAATTCAGAAGCAGTTCGGTGAAATGCATTACCCTCCTTCTTCGTCTTCTTCGCCTCCTCTTTACCATCATGCTTTGCAGGACATGTCTTACGGCGTTTGGGGAGGAAACCATGCTGAGCCTGTGCTTCATTATCAGGCAAACAACGAGTTACGTTTTGGGGGTGCTAATTTATGGACAAATAGTAGCAGCGCGATGGGTTTCAAGAAGAATAATGAACAAGACATACATCCTCATCAGGGTTTATCACTGTCACTTTCCTCGAACTCACAATCTAAGCCTTGTTTTGAAGAAGGGTCTGCATCGGATGACCCTACTCAATATTCAAAGTCATTGAAGTCCTCCATGAAGTTGAACGTTCTTTCAAACAATACTGTTTATCGAAATGTTGGCCCCCTCGGTCCCTTCACCGGGTACGCCACGATTTTGAAGAGTTCAAGATTCTTGAAGCCGTGTCAACAGCTGTTAGATGAGTGGTGCTGTCAATACGGTTCAAAGTCTGCGAAAGGAGGGGGTTGTGACGTTCCAGAGTGGGTCTCTCGAGATGTCAGTGCTGCCTCTATTTCTGCAGCTGCAACTGCTGGTGATGCTCTTAATGTTGATGAAAGTGGGGGTGCTGCAAAAGGTGTTAGCTATCTGGGTGCTTCATCCTCTGTGTTGTATAGTTCAAATGAAAATGATAATACAAATAGCGCTGATGGCGGAGCCACGAGTAACTTTTGTCTTTCTTCTCGGCCAGAGTGCCAAAAGAACAAGGCAAAACTACTGTACATGCAAGAGGAGGTTACTAGGAGATACAAGCAATACCATCAACAGATGCAAATGGTTGTTCAATCGTTCGAGTCTGTTGCTGGTCTTAGTTCTGCAACTCCTTATGTCTCCTTGGCTCTCAAGTCAGTATCGAAACACTTCAGATGCTTAAAAGGTGCTATCTCTGATCAACTGAAGCTTACATGTGAAGTCTTGGGAGAGGAATTTTCAATGCCAACTACAAGTAATGGTGGTAAATTTGACAGTAACATGGCAAGGCTAAGGTGCATGGATCAAAGTTTTCAGAAAAACAAATCTTTGGGGGCTAACATAAACTTTCTTGAGCCCCAACAGCACGTGTGGAGACCCCAGAGAGGCTTACCAGAAAGATCAGTGGCAATTCTTAAAGCTTGGCTGTTTGAGCATTTTCTTCATCCGTACCCCACGGACACTGATAAACACATGTTGGCTACCCAAACAGGTCTTTCAAGAAACCAGGTATCAAATTGGTTCATAAATGCTCGAGTGCGTGTGTGGAAGCCAATGGTTGAGGAAATACACATGCTCGAAACAAAGGGTGCAACAGAAGCCCACCAAGCCTCTAATAAAAGTGAGCAGGTAGCTTCTGCATCTGAAGGAAGCAACCAGCCCAAATCAGATCACCAACCTGTGAGCAGGTATGGCACGCATGCATCATCACATGCAATCCCTGACAAGCAGTTTCAGTGTTTGGAAATGGGGTCATCATCCTCAGCAGGCAATGAGGAACACATCGGGATGAATGAAGACCAATGGAATCAAGAGAAGAGGTCAAAACTGGAATGCCAGATTGCTGCCACACCAAACATGGATGGAACAGTGATGGGGTTTATGCCCTACAGAAGAGGTGGACTTGAGGTTGGTGGTCTTGGATCTGTGTCACTCACTTTGGGTCTTAGGCATAGTGTTGAAGGTGTGCAACAGCAACAACTGCAACAACAGGAGGAGCTTAGGCGTCAGTTTGGAGGGCACATGATCCATGACTTTGTGGGCTAG | 3999 | 0.4431 | MSSLRPELHVAQQLRRDKLRIQNSSQHLQEFPSNLEQLSLHPGFNLDLLQVRNVRNGNMLDEALYSSDMISFSTASNPLSTPRNPLECQELMMAQYGSTSFPHSSSPKDQQCEPRHLGANWMVNYNESNPNTNSTTFFSSELNNNASGEIANREIQKQFGEMHYPPSSSSSPPLYHHALQDMSYGVWGGNHAEPVLHYHANNELRFGGANLWTNSSSAMGFKKNNEQDIYPHQGLSLSLSSNSQSKPCFEEGSASDDPTQYSKSLKSSMKLNVLSNNTVYRNVGPLGPFTGYATILKSSRFLKPCQQLLDEWCCQYGSKSAKGGGCDVPEWVSRDVSAASISAAATAGDALNVDESGGAAKGVSYLGASSSVLYSSNENDNTNSADGGATSNFCLSSRPECQKNKAKLLYMQEEVRFFSAQCRIIVTLLACLCSLLFCLVCFWYVCMANVCQRFLLFCNMKKRPNALKLPCATLGHLVSIIVDAKLMKSLLVEIFTTTIYVLRMWVKAKMYICVGVSICFGILCANSRNEDSAYARTVLLDNLSPVHSPLSESSLFLPQFLNKVFEVLSYPVAIVQIGGLLVEVGMSSLRPELHVAQQLRRDKLRIQNSSQHLQEFPSNLEQLSLHPGFNLDLLQVRNVRNGNMLDEALYSSDMISFSTASNPLSTPRNPLECQELMMAQYGSTSFPHSSSPKDQQCEPRHLGANWMVNYNESNPNTNSTTFFSSELNNNASGEIANREIQKQFGEMHYPPSSSSSPPLYHHALQDMSYGVWGGNHAEPVLHYQANNELRFGGANLWTNSSSAMGFKKNNEQDIHPHQGLSLSLSSNSQSKPCFEEGSASDDPTQYSKSLKSSMKLNVLSNNTVYRNVGPLGPFTGYATILKSSRFLKPCQQLLDEWCCQYGSKSAKGGGCDVPEWVSRDVSAASISAAATAGDALNVDESGGAAKGVSYLGASSSVLYSSNENDNTNSADGGATSNFCLSSRPECQKNKAKLLYMQEEVTRRYKQYHQQMQMVVQSFESVAGLSSATPYVSLALKSVSKHFRCLKGAISDQLKLTCEVLGEEFSMPTTSNGGKFDSNMARLRCMDQSFQKNKSLGANINFLEPQQHVWRPQRGLPERSVAILKAWLFEHFLHPYPTDTDKHMLATQTGLSRNQVSNWFINARVRVWKPMVEEIHMLETKGATEAHQASNKSEQVASASEGSNQPKSDHQPVSRYGTHASSHAIPDKQFQCLEMGSSSSAGNEEHIGMNEDQWNQEKRSKLECQIAATPNMDGTVMGFMPYRRGGLEVGGLGSVSLTLGLRHSVEGVQQQQLQQQEELRRQFGGHMIHDFVG | 1332 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vium2741g00004 | 1332 | MobiDBLite | consensus disorder prediction | 815 | 847 | - | - | |
| Vium2741g00004 | 1332 | Pfam | Homeobox KN domain | 1126 | 1165 | IPR008422 | GO:0003677|GO:0006355 | |
| Vium2741g00004 | 1332 | ProSiteProfiles | 'Homeobox' domain profile. | 1106 | 1169 | IPR001356 | GO:0003677 | |
| Vium2741g00004 | 1332 | PANTHER | HOMEOBOX PROTEIN TRANSCRIPTION FACTORS | 767 | 1195 | - | - | |
| Vium2741g00004 | 1332 | FunFam | BEL1-like homeodomain protein 9 | 1112 | 1174 | - | - | |
| Vium2741g00004 | 1332 | SUPERFAMILY | Homeodomain-like | 1111 | 1175 | IPR009057 | - | |
| Vium2741g00004 | 1332 | MobiDBLite | consensus disorder prediction | 1181 | 1220 | - | - | |
| Vium2741g00004 | 1332 | Gene3D | - | 1112 | 1174 | - | - | |
| Vium2741g00004 | 1332 | Pfam | Associated with HOX | 295 | 416 | IPR006563 | - | |
| Vium2741g00004 | 1332 | Pfam | Associated with HOX | 880 | 1050 | IPR006563 | - |
Showing 1 to 10 of 16 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vium2741g00004 | - | - | vum:124831694 | 2622.04 |
Showing 1 to 1 of 1 entries