Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2739g00001 ATGGAGGCGTTCTATTTGTGGTGGGTGAATGGCCAGAAGCAAACTTTGCTCATGCTCAACCAAATACTGAGATGGCTGAAGAAACCAAAGGTACTGAGAATCATATGTCTTGCTTCATCTGTAATTGGACTGCTCTGTTATGCACTCAGTTCCTCTTTCCACTTTTTACTGGGAAACTGGAGGTGCTGGAAGATGCTTCTATATATGGTTTTCCGTTTCATCGTTTTCCTTGTCGTCTTGTTCTCAAAGGCAAGGTCGAGTTCCATTTCTCTCCCGTTGGAATCTCGTTTAGTGTTTTTGGTTGTCATAATCACTTCCGTTTATTCCTTTTTTTATGATAACGTGGTGAAGGGTAAACCTGATGCATACAGTTTGATCTCTTGTGCTGCTTTTGCTATCATGTCGCTTGGCTTGTCAAATCTCACCCAATTTGGATTCCAAGTTGATCTAGTACATTTCTTCTGCGCATGTCTAATAATACAGCTCATGAAGATCAAATTGTGGTTAGTCATTGTTGGAGCAGGTTTCACTTATTCCCTTCTCCTGCTTCCAGACCATCCGCGTGACACACAAGAGGAGAATCTTCAGCTCCAGGAACAAAATCAAGTAATCATTCAAGTTGATGACATCGAGAGTCAAGATATCATGTCACAACAAGCTAATTCTGATGTTCATAGTACTCTAGGTACCTCACTAGAAGACGGGGATCTTAGAAAAAGCGATTCACATCCACAAGATGCTGATCTTATCATCCAACAACTCAAGAATTGCATAAAGAAGCTTGAGAAGGAGAATCAGATGCTCGCTCCCATGGTTTGCAGTGAGGTGGACAAATACCTTAAAGCCGTGTCTGACTCCAAAGAAGTACCACAGCCTGACGTCAACTTGGTGAGGGATGCACTTCCACCAGGAATTAGTACGCGCCTTAAGGAAACCCTGAAGCAGATGGTGGATGCAGGTTTGGATGAGGAATGCAGCGACATTTACAGTAAATGGCGAAGGGAGTTTCTAGAAGATTGTCTGCGCGTACTAGGGTTACAATTTCAAACGCCCAATACTGAGGATGTTCAGATGTGGTTAAAAACATGCAAGGCAGCTGGGAAGATACTTTTTCCCATTGAAAGGAGGCTCTGCGATGACCTCTTTTCAGGGCTCTCTGTTGCGGATGTCTCCTTCGAGAAGGTTTGCAAGGAACTGACAATTGGTCTAGTGAGTTTTGCCTATACCACCATAACAACTTGGAGCTATTTGCCAAATCTTTTGTTGGAAGTCGTCCCTAAAATGTCGGAGTCATTGCGCGAGCTGATCGTCTCACAAAATTCGTTTCACGAATTGTCGTTCGTAGATGCTCACGAAGATGACATTCGTTCAAGATTGGTTATTTCAAACAAGGTGAAGAATAAAGAAAATGTGATAGGTGCTAAATCATGTGCAATAAAAGATTTGTTGAAGAGCTCAGTGACTCACTTAGACAATCTTATGAAGGAAGTCATGTTAAAAAGTGTCATGAAGGAAACCTCAAAGAATTTCGTGAAAGGGATCCCGTTGAAGAGTCTTATGAAGGATGTCTCATTGAAGAGTCTCTTGAAGGAAACTTCGTTGAAGAGTCTCCTGAAGGGAGGTCTATTGAAAAGTGATGGAGGGGGTCTCGTTGAAGAGATTCATGAAAAAAGCCTCATTGAAGAGATTCATGAAGGAAGCCTCTTTGAAGAGTCTCGTGAAGGAAGCCTCATCGAAGAGATTCATGTAGGAAGTCTCGTTGAAGAGTCTCATAAAGGAAGCCTCGAGTCTGATGAAAAAAGTCCTGTTGAAGAATTTCATGAAGAAAGCCACGTCAAAGAGTCTCATAAAGGGGCCCCTGTTGGAGAGTCTCATGAAGGAAGCCCCATCACAGAGCCTCATGAAGAGGATCTCGTTGAAGAGTCTCATGAAGGGGGCTCCGTTGAAGAGTCTCAAAAAAGAAACCCATTGCAAATTTTCATGAAAAAAGCCCACTTGAAGACTAAAGCAAGAAGGGTAGGGTTTGGATGA 2031 0.4269 MEAFYLWWVNGQKQTLLMLNQILRWLKKPKVLRIICLASSVIGLLCYALSSSFHFLLGNWRCWKMLLYMVFRFIVFLVVLFSKARSSSISLPLESRLVFLVVIITSVYSFFYDNVVKGKPDAYSLISCAAFAIMSLGLSNLTQFGFQVDLVHFFCACLIIQLMKIKLWLVIVGAGFTYSLLLLPDHPRDTQEENLQLQEQNQVIIQVDDIESQDIMSQQANSDVHSTLGTSLEDGDLRKSDSHPQDADLIIQQLKNCIKKLEKENQMLAPMVCSEVDKYLKAVSDSKEVPQPDVNLVRDALPPGISTRLKETLKQMVDAGLDEECSDIYSKWRREFLEDCLRVLGLQFQTPNTEDVQMWLKTCKAAGKILFPIERRLCDDLFSGLSVADVSFEKVCKELTIGLVSFAYTTITTWSYLPNLLLEVVPKMSESLRELIVSQNSFHELSFVDAHEDDIRSRLVISNKVKNKENVIGAKSCAIKDLLKSSVTHLDNLMKEVMLKSVMKETSKNFVKGIPLKSLMKDVSLKSLLKETSLKSLLKGGLLKSDGGGLVEEIHEKSLIEEIHEGSLFEESREGSLIEEIHVGSLVEESHKGSLESDEKSPVEEFHEESHVKESHKGAPVGESHEGSPITEPHEEDLVEESHEGGSVEESQKRNPLQIFMKKAHLKTKARRVGFG 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2739g00001 676 MobiDBLite consensus disorder prediction 221 243 - -
Vium2739g00001 676 PANTHER EXOCYST COMPLEX PROTEIN EXO70 197 458 IPR004140 GO:0000145|GO:0006887
Vium2739g00001 676 MobiDBLite consensus disorder prediction 588 659 - -
Vium2739g00001 676 Gene3D Exocyst complex component Exo70 238 523 - -
Vium2739g00001 676 Pfam Exo70 exocyst complex subunit 358 459 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vium2739g00001 676 SUPERFAMILY Cullin repeat-like 279 442 IPR016159 -
Vium2739g00001 676 MobiDBLite consensus disorder prediction 588 621 - -
Vium2739g00001 676 MobiDBLite consensus disorder prediction 628 650 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2739g00001 Vium-Chr2739 2821 4851 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2739g00001 290 436 EXO70 exocyst subunit family AT5G58430 40.506 1.77e-23 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2739g00001 - - vum:124831685 1285.01