Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vium2728g00012 | ATGGAGAGTTATTTGCATGAAAATTTTGGAGGAGTGAAGTCCAAAAACACTACTGACGAAGCTCTTCAAAAATGGAGGAAGGTATGTGGGGTGGTAAAGAACCCCAAACGACGCTTTCGTTTCACTGCCAACATCTCTAAACGTTACGAAGCAGCTGCAATGCGTCGTACCAATCAGGAGAAGCTAAGGGTTGCTGTTTTGGTTTCCAAAGCTGCATTTCAATTTATCCAAGGTGTTCAACTAAGCGATTATGTTGTGCCTGATGAAGTTAAAGCTGCTGGTTTCCAAATCTGTGCGGATGAAATGGGGTCTATTGTTGAAGGCCACGACGTAAAGAAGCTTAAGTTTCATGGTGGAGTAAATGGCATTGCAGAAAAGCTCTCAACATCAACCACCACGGGGCTTAGTGGTGATTCTGAATCACGGCGCAGGAGACAAGAGCTTTTTGGAGTCAATAAATTCACTGAAAGTGAAGTTCGGAGTTTCTGGGTTTTTGTTTTCGAAGCCGTACAAGACATGACTCTCATGATCCTTGGGGCGTGTGCTTTTGTGTCTCTGATAGTTGGCATATTAACGGAAGGATGGCCCAAAGGTGCTCATGATGGCCTTGGAATTGTTGCAAGTATCTTACTAGTAGTCTTTGTGACAGCAACAAGTGATTATCGCCAATCGTTGCAATTCAAGGACTTAGACAAGGAGAAGAAAAAGATTTCCATTCAGGTTACAAGAAACGGTTACAGGCAGAAAATGTCAATATATAGTTTACTTCCCGGTGACATTGTTCATCTTGCCATTGGAGACCAAGTTCCCGCGGATGGCTTATTTGTTTCAGGATTTTCTGTGTTGATTGATGAGTCAAGTTTAACTGGTGAGAGTGAGCCAGTGATGGTGACTTCCCAAAACCCTTTTCTTCTATCTGGAACCAAGGTTCAAGATGGTTCCTGCACCATGTTGGTTACCACAGTCGGGATGAGGACTCAATGGGGCAAGTTGATGGCAACTCTGAGTGAAGGAGGAGATGATGAAACCCCATTGCAAGTTAAACTGAATGGAGTAGCAACCATTATTGGGAAGATAGGACTATTCTTTGCAGTGGTTACCTTTGCAGTTTTGGTGAAAGGACTCATGGGCCGCAAACTCAAAGAGGGAAGATTCTGGTGGTGGTCAGCAGATGATGCAATGGAGATGTTGGAATTCTTTGCCATTGCGGTTACCATTGTCGTTGTTGCTGTCCCAGAGGGGTTACCCCTAGCCGTGACATTGAGCCTTGCATTTGCAATGAAAAAGATGATGAATGACAAGGCCCTGGTGAGGCATTTGGCAGCTTGTGAAACTATGGGATCAGCCACAACTATATGCAGTGACAAGACTGGGACATTGACAACCAACCGCATGACTGTGGTGAAAACATGTATTTGTATGAAGGTCAAGGAGGTGAGTAATAATTCTAGTTTGTCCTCTGAACTCCCAGGCCCTGCTTTGAAAATGTTGCTTCAGTCAATATTTAGTAACACTGGAGGAGAAGTTGTGGTTAACAAGAAAGGTAAGCGTGAGATCTTGGGGACTCCAACAGAGTCAGCACTGTTGCAGTTTGGCTTATCATTGGGTGGGGATTTTCATGCAGAGAGACAAACATGTAAGATTGTTAAAGTTGAGCCATTCAACTCTGAGAAGAAAAGAATGGGTGTGGTTTTGGAGATCCCTGGAGGAGCTTTAAGGGCTCATTGTAAAGGTGCTTCCGAAATAATTCTGGCTGCTTGTGACAAGGTGATAAACTCAGAGGGTGTTGTTGTCTCCATCGATGAAGAATCGGGTAATTATCTCACGAGTACAATCAACCAGTTTGCTGGTGAGGCACTAAGAACTCTCTGCCTTGCATATATTGAATTGGGTCCAGACTTCAGAGAGAAGACTCAGGAGGAATTGTTTGATCTAATTCCCAAAATTCAGGTTATGGCTCGATCATCACCTCTAGACAAACATACACTAGTGAAACACCTACGTACCACGTTCGGTGAAGTTGTAGCTGTAACTGGTGATGGAACAAATGATGCCCCGGCCCTTCATGAAGCTGACATTGGACTTGCTATGGGAATTGCTGGAACTGAGGTTGCAAAAGAAAGTGCAGATGTCATTATTTTGGATGATAATTTCTCCACAATAGTGACAGTAGCTAAATGGGGGCGTTCAGTTTACATAAATATTCAGAAATTCGTACAGTTCCAGCTCACTGTAAATGTGGTTGCATTACTAGTGAACTTCACGTCAGCATGCATGACAGGCAGTGCACCCCTCACAGCTGTTCAACTTTTGTGGGTGAACATGATAATGGACACGCTGGGAGCACTTGCACTTGCAACAGAACCCCCAACTGATGATTTGATGAAGCGTGCACCAGTTGGGAGGAGAGGTGACTTCATCAACAATGTCATGTGGAGGAATATCTTAGGACAATCATTGTATCAGTTTGTGGTGATATGGTTTCTTCAGACAGTAGGTAAATGGGTCTTTTTCATCAGAGGCCCGAATGCTGAAGTGGTTTTAAACACTCTTATTTTCAACACATTTGTATTCTGTCAGGTTTTCAATGAGGTAAATTCACGTGAGATGGAGGAAATAGATGTTTTTAAAGGCATATGGGATAATCATGTGTTTATAGGTGTCCTCGGTTGCACTGTTTTCTTTCAAATCGTAATAGTTGAGTACTTGGGAACCTTTGCCAACACAACACCTCTCAGTCTGGTACAATGGATCTTCTGCTTAGGGGTTGGATATGGAAGCATGCCACTAGCAGTTCGCTTAAAGCAGATCCCCGTCTGA | 2820 | 0.4355 | MESYLHENFGGVKSKNTTDEALQKWRKVCGVVKNPKRRFRFTANISKRYEAAAMRRTNQEKLRVAVLVSKAAFQFIQGVQLSDYVVPDEVKAAGFQICADEMGSIVEGHDVKKLKFHGGVNGIAEKLSTSTTTGLSGDSESRRRRQELFGVNKFTESEVRSFWVFVFEAVQDMTLMILGACAFVSLIVGILTEGWPKGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDKEKKKISIQVTRNGYRQKMSIYSLLPGDIVHLAIGDQVPADGLFVSGFSVLIDESSLTGESEPVMVTSQNPFLLSGTKVQDGSCTMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVLVKGLMGRKLKEGRFWWWSADDAMEMLEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNRMTVVKTCICMKVKEVSNNSSLSSELPGPALKMLLQSIFSNTGGEVVVNKKGKREILGTPTESALLQFGLSLGGDFHAERQTCKIVKVEPFNSEKKRMGVVLEIPGGALRAHCKGASEIILAACDKVINSEGVVVSIDEESGNYLTSTINQFAGEALRTLCLAYIELGPDFREKTQEELFDLIPKIQVMARSSPLDKHTLVKHLRTTFGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALLVNFTSACMTGSAPLTAVQLLWVNMIMDTLGALALATEPPTDDLMKRAPVGRRGDFINNVMWRNILGQSLYQFVVIWFLQTVGKWVFFIRGPNAEVVLNTLIFNTFVFCQVFNEVNSREMEEIDVFKGIWDNHVFIGVLGCTVFFQIVIVEYLGTFANTTPLSLVQWIFCLGVGYGSMPLAVRLKQIPV | 939 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vium2728g00012 | 939 | SMART | Cation_ATPase_N_a_2 | 115 | 190 | IPR004014 | - | |
| Vium2728g00012 | 939 | Gene3D | - | 139 | 336 | - | - | |
| Vium2728g00012 | 939 | NCBIfam | calcium-translocating P-type ATPase, PMCA-type | 110 | 631 | IPR006408 | GO:0005388|GO:0005524|GO:0016020|GO:0070588 | |
| Vium2728g00012 | 939 | Pfam | E1-E2 ATPase | 237 | 431 | - | - | |
| Vium2728g00012 | 939 | PANTHER | CATION TRANSPORTING ATPASE | 72 | 628 | - | - | |
| Vium2728g00012 | 939 | Pfam | Cation transporter/ATPase, N-terminus | 117 | 185 | IPR004014 | - | |
| Vium2728g00012 | 939 | FunFam | Calcium-transporting ATPase | 463 | 647 | - | - | |
| Vium2728g00012 | 939 | Pfam | Cation transport ATPase (P-type) | 512 | 590 | - | - | |
| Vium2728g00012 | 939 | Gene3D | - | 168 | 449 | - | - | |
| Vium2728g00012 | 939 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 455 | 461 | IPR018303 | - |
Showing 1 to 10 of 33 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vium2728g00012 | K01537 | - | gmx:100815662 | 1134.4 |
Showing 1 to 1 of 1 entries