Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2727g00010 ATGGTTTCAAAGCAACTCGATCGCGTGGGTGGTAAGGTTCGGGTTATCGCTAGGATCCGTGGGTTTTCGGGTCCTGAGGCTAATTTGGAGCCTGACACTTCAAGGACTGTGGATTGGATTTCAGTGAATGGCGAAAATTTGGATGATGTTTCCATCTCCTTCAGAGACCATCCCAGTCGTTATTTGGTGGACTATTGCTATAAGGAAGATGAAGACAGTGAAATGATATATTCAAGGGAGGTAAAGCCTTTTGTGTCTGCAGCTTTTGAAGGTCATAACAGCACTGTTATTGCACATGGAGCTAGGGGTAGTGGAAAGACCCACATAATTCAGGGCTCTGCTGAGAGGCCGGGTTTGGCAGTGCTTGCTATTGCTGAGTTTCTTCCAATTGCTGAGAAAAATGGGAAATCCATAAGTGTTTCTTTCTATGAGGTTGATCATCAGGAACGGGCCATGGATTTATTAAATCCAGAGAAGCCGCCAATCTTGGTTTTTGAAGATCGTGGTAGAAATCAGTTTAAAGGATTGAGTCAGGTTCCTGTGAAATCAGTTAGTGAATTTCAGAATTTGTACTCCACTGCATGTTTGAGCTTGAAGGGAGCTCCCAAAAAAGGTGGTCAAAGAAGTCATATGGGATTGATTGTGAATGTCGTTTCCCGGAATGAAAGTGTAGGAAGTACTGTCAGCAAAATGAATTTTGTTGACTTAGCAGGGTATGAAGATACCAGAAAGAAAAGTAGTGATGGCTCCTGCCTAACTGAGATTAACAAAATTAACAAGTCAATATATGCATTATTGAATATTTGCCATGCTTTGAGTACAAATGAAAGTCATATTCCCTACCGGGAAAGCAAGCTTACGCGCATACTGCAGGATTCTTTGAGGGGAACTAGCAGAATTTTACTGGTTTCATGCTTGAACCCATCATTTTGCCAAGACACTATTTACATGGTAAGCTTGGCTTCAAGGTCATGTCATCGGATTCATCATCAGACATTCTTAGATTCCACCAAGAAAAGTATAAGTTCAGCAAATATGAGACAGATACCTAAAAGTGTTTCTGGGACAGCAAAGAAATTTCATGGTTCTTCTAAACTAACGAAAGGAAGGAAATTGTTTGATGAAGCTAGTCATTCCACACCTAAGGTTGAGAAGGAAATGGTTACTAAAGCATCAAAGCCTTTGATGGATAACTCATTACCTGAGACTGGAAATCATGACAACTCTGGAGTGGAAACGATAGTGAATAATTTAGCATTGACAAATGTTTCATTTCCGAAGGATGACTTATTTGCAAAAGCTAGTCAGGACATGAAACTTTATCCCCCTTTGGAAAATGGTGATTCGTCCTTGAACGCTAGCAGTGAAGTGGAAATCAATTCCCTAGCAGCTAAGGATGTTTTAGTGGATGGAGATGAAGGTAAAAAGGAGAATACCCCTTGTATCAATCATTCCTCTGAATCAATGTCAATAATAGTTCACGAAGGTCATAATTCACCACCCATTAGTTCACAGTTGCGCGATCTTTCCAATAGTCTTAAAATGCTATGCTCTTCAACTTCATCATGCTTGCAAAATTCAGAAAAACAGCCCATTCCAGCTATAGAACCAAAAACTCCTATAATTCAACAGAACATGAGCCAATGGGATGAAATGAATGGCAAAAGTCCTTGGGAGACATTCAGCATGCGGGGCTCTGGGATGAAGAGTTCCATCGTTCAAGAATATCTTAGATTTTTGAACACGGCTGACAAGGAAGAATTGAAAAGATTAAAGGGAATTGGAGACAAAAGAGCTAACTTTATACTTGAACTTCGAGAAGAATCTCCAGAACCTTTCAAAAGTCTAAACGATTTAAAGGACATTGGGCTTTCTGCAAAGCAGATTAAGGGAATGATGAAGAAGGAAGTTGGAGAGCTTTTCAGTGAATTATAA 1935 0.401 MVSKQLDRVGGKVRVIARIRGFSGPEANLEPDTSRTVDWISVNGENLDDVSISFRDHPSRYLVDYCYKEDEDSEMIYSREVKPFVSAAFEGHNSTVIAHGARGSGKTHIIQGSAERPGLAVLAIAEFLPIAEKNGKSISVSFYEVDHQERAMDLLNPEKPPILVFEDRGRNQFKGLSQVPVKSVSEFQNLYSTACLSLKGAPKKGGQRSHMGLIVNVVSRNESVGSTVSKMNFVDLAGYEDTRKKSSDGSCLTEINKINKSIYALLNICHALSTNESHIPYRESKLTRILQDSLRGTSRILLVSCLNPSFCQDTIYMVSLASRSCHRIHHQTFLDSTKKSISSANMRQIPKSVSGTAKKFHGSSKLTKGRKLFDEASHSTPKVEKEMVTKASKPLMDNSLPETGNHDNSGVETIVNNLALTNVSFPKDDLFAKASQDMKLYPPLENGDSSLNASSEVEINSLAAKDVLVDGDEGKKENTPCINHSSESMSIIVHEGHNSPPISSQLRDLSNSLKMLCSSTSSCLQNSEKQPIPAIEPKTPIIQQNMSQWDEMNGKSPWETFSMRGSGMKSSIVQEYLRFLNTADKEELKRLKGIGDKRANFILELREESPEPFKSLNDLKDIGLSAKQIKGMMKKEVGELFSEL 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2727g00010 644 ProSiteProfiles Kinesin motor domain profile. 12 327 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium2727g00010 644 PANTHER KINESIN-RELATED 16 445 IPR027640 GO:0003777|GO:0007018
Vium2727g00010 644 PRINTS Kinesin heavy chain signature 230 248 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium2727g00010 644 PRINTS Kinesin heavy chain signature 279 300 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium2727g00010 644 PRINTS Kinesin heavy chain signature 91 112 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium2727g00010 644 SMART kinesin_4 10 331 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium2727g00010 644 FunFam Kinesin-like protein KIN-10C 566 640 - -
Vium2727g00010 644 Pfam Helix-hairpin-helix motif 580 627 - -
Vium2727g00010 644 Gene3D Kinesin motor domain 1 326 IPR036961 -
Vium2727g00010 644 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 323 IPR027417 -
Vium2727g00010 644 Gene3D - 568 640 - -
Vium2727g00010 644 Pfam Kinesin motor domain 43 323 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium2727g00010 644 SUPERFAMILY RuvA domain 2-like 573 635 IPR010994 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2727g00010 Vium-Chr2727 134397 139691 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2727g00010 6 354 Calmodulin-binding Proteins AT5G65930 28.941 2.71e-30 125