Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2724g00005 ATGACATCCACTATGCCTGATAAATCCATAATTTGTTATACACCACTCATGGTAACAACAAATGGGTTGTGGAAGACCAATAACCTTTTAGATTTCTCTCTTCCTCTGTTTACCTTGCAATTAACGTTAGTTGTATCTGCAACACGTTTCTTTGTTTTAATCCTCAAGCCCTTTCACCAACCTCGTGTAATTGCTGAAATCTTGGGTGGATTGCTTCTGGGTCCATCAGTGCTTGGAAGAAATAAAAATTTTGCCAATATTGTGTTCCCTATGAAAAGTGTAATGCTGGTGGAGACAATGGCAAACATGGGTCTGATATACTTTGTGTTCCTGATTGGGTTAGAGATGGACGTTTCGATCATCAAACGTGCTGGAAAGAAGACGGTGTTAATTTCCCTTGCTGGTATGGTGATTCCCTTTATGGTTGCTATGTGTTTATCCTCTTTAATAGCTAACACAGACGAAAACATAAATCAAGCCAGCTGTATCCTCTATCTTGGTATTGTTCTATCTGTCACTGCATTCCCGGTGCTTGCTCGAATGCTTGTTGAGCTCAAACTTATCAACACAGACTTAGGGAAGCTTGCTCTATCAACTTCTCTCATCAATGATGTGTGTGCATGGATGTTGTTGGCTCTAACTATTGCTTTATCAGAGGAAATAATTAGCGCTTGGGTATCATTGTGGGTTCTGCTATCAAACCTTGTTTTTCTTTCTTTCTCCTTTCTTATTGTTAGACCAACAATGGCGTGGTTGATCGAGAAAACTCCAGACGGAAAACCCTTCAGTGAGTTTCAATTATGCATTGTGCTCACTGGTGTATTGATGTCGGCCTTCATCACGGATGCCCTTGGAACACATTGTGTTTTTGGAGCTTTTGTGTATGGCCTAGTCATTCCAAATGGGCCACTTGGAGCTGCAATAATAGAAAAGCTTGAAGACTTTGTTTCAGGACTTTTGCTTCCTCTCTTTTATGCCATTAGTGGGCTCAAGACAGATATCAGCTTAATCAGCGGAGCTAATACTTGGGCTTTTATTCTCTCAGCGATTTCTCTAACTTATCTCGGCAAGATTGCTGGAATTCTCCTTGTTTCAAACATGTTGCAGATACCAAATCGTGATGGAGTTGTTCTTGGTTTACTTATGAACGCTAAAGGCATTATTGAAATTATTGTGCTCAATGTTGGGAGGGAACAAAAGGTCTTGGATGATAAAATATTTTCAGTTATGATCATTGTAATACTGATAATGACAGCATTCATTTCACCAATTGTAAAATTAATTTATAGGCCAAGAAAAACGCTTGTACCTTATAAAAGGAGAACAATACAAAGTTCAAGACTTGATGGAGAGTTAAGAGTCCTTGTGGGCATTCACACCCCTCGAAATGTTCCCACACTAGTTAATCTCCTTGAAGCAACTTATCCCAATAAAAGGTCTCCAATGTGTGCTTATGTGCTCCACTTGGTTGAACTCACTCGTAGAGCTTCTGCAATGCTAATTGTTCATGCCAATAGACAATCAGGAGGTCCAGCCCTCAACAAAACACAAGCACAAACCGACCACATCATCACGGCATTTCATAACTTTGAGGAACAGGTCAATTATGCTCAAGTCCAACCCTTAACAGCCATTTCCCCTTACTCCACCATGCATGAAGACATATGCAATTTGGCTGAAGAAAAAAGGGTGTCCATCATCATCATTCCTTTCCATAAGCAACAAACAGTAGACGGACAAATGGAAGATACAATCCCAGCATTAAGAATGGTGAACCACAATCTACTACAAAACTCACCATGCTCAGTTGGTATACTTGTGGATAGGGGATTTAATGGATCCAACCGCTTGATTGGAAATCAAGCATGTCATAAAGTGGCTGTGCTATATTTTGGAGGACCAGATGACAGAGAGGCATTAGCTTATGGATGGAGAATGTCAAGACATCCAAGGGTTCACCTTACTGTCATGCACTTCATTCCAACTGAGTATTCATATCAAAGTTCAGAAACAGATCGCTTATGGGCAAAGATTGATCGAAGTTTCACCACTATGAAAAATGGAGGGGAAAACAAACTGGATAATGAGTATATAAGTGAGTTCAAGAATATGATTGCACATGATGATTCAGTCATTTACATAGAAAAGGTTGTGAACAATGGGGAGGAAACAGTTGCAGCAATAAGATCAATCAATAACATGAATGACTTGTTCATAGTTGGAAGAGGACAAGGGACAATGTCACCACTAACAGATGGCCTTACAGATTGGAGTGAGTGTCCTGAGTTAGGAGCCATTGGCGATTTACTAGCATCTTCAGACTTTGAAACAACGGCTTCGGTGTTGGTGTTGCATCAATATGTAGGGCAAGGACCAGATGGAGAGGACAATTTTGTCGTTGAAAGACCATGGGAATCAGCTGAATCCCGACATAGCATAAATCAACAACAACATATGCAAAGATATGTAATGCCAATGGGAACAGGACACTCTTCTGTAATGTTTACGATAGCATGA 2517 0.4021 MTSTMPDKSIICYTPLMVTTNGLWKTNNLLDFSLPLFTLQLTLVVSATRFFVLILKPFHQPRVIAEILGGLLLGPSVLGRNKNFANIVFPMKSVMLVETMANMGLIYFVFLIGLEMDVSIIKRAGKKTVLISLAGMVIPFMVAMCLSSLIANTDENINQASCILYLGIVLSVTAFPVLARMLVELKLINTDLGKLALSTSLINDVCAWMLLALTIALSEEIISAWVSLWVLLSNLVFLSFSFLIVRPTMAWLIEKTPDGKPFSEFQLCIVLTGVLMSAFITDALGTHCVFGAFVYGLVIPNGPLGAAIIEKLEDFVSGLLLPLFYAISGLKTDISLISGANTWAFILSAISLTYLGKIAGILLVSNMLQIPNRDGVVLGLLMNAKGIIEIIVLNVGREQKVLDDKIFSVMIIVILIMTAFISPIVKLIYRPRKTLVPYKRRTIQSSRLDGELRVLVGIHTPRNVPTLVNLLEATYPNKRSPMCAYVLHLVELTRRASAMLIVHANRQSGGPALNKTQAQTDHIITAFHNFEEQVNYAQVQPLTAISPYSTMHEDICNLAEEKRVSIIIIPFHKQQTVDGQMEDTIPALRMVNHNLLQNSPCSVGILVDRGFNGSNRLIGNQACHKVAVLYFGGPDDREALAYGWRMSRHPRVHLTVMHFIPTEYSYQSSETDRLWAKIDRSFTTMKNGGENKLDNEYISEFKNMIAHDDSVIYIEKVVNNGEETVAAIRSINNMNDLFIVGRGQGTMSPLTDGLTDWSECPELGAIGDLLASSDFETTASVLVLHQYVGQGPDGEDNFVVERPWESAESRHSINQQQHMQRYVMPMGTGHSSVMFTIA 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2724g00005 838 Gene3D - 36 435 IPR038770 -
Vium2724g00005 838 Pfam Sodium/hydrogen exchanger family 44 425 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vium2724g00005 838 PANTHER CATION/H + ANTIPORTER 9 788 - -
Vium2724g00005 838 Gene3D - 479 761 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2724g00005 Vium-Chr2724 19267 22341 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2724g00005 2 810 Antiporter Super Family AT2G13620 60.543 0.0 993
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2724g00005 K26731 - gmx:100800514 1333.93