Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2720g00012 ATGGCACCAAAGAAGGATAAGGCTCCTCCACCTTCCTCCAAGCCCGCCAAATCTGGCGGTGGCAAGCAGAAGAAGAAGAAGTGGAGCAAGGGAAAGCAAAAGGAGAAGGTGAATAACATGGTGCTATTTGATCAGGGTACCTATGACAAACTCCTCTCAGAAGCACCCAAATACAAGCTCATCACTCCTTCAATTCTCTCTGATCGTATGAGGATTAATGGATCACTTGCAAGGAAGGCTATAAGAGAACTGATGGCCAGAGGTTCAATCAGGATGGTGTCTGCCCATGCCAGTCAGCAAATTTACACCAGGGCAACAAACACCTAA 327 0.4709 MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKYKLITPSILSDRMRINGSLARKAIRELMARGSIRMVSAHASQQIYTRATNT 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2720g00012 108 Pfam S25 ribosomal protein 7 105 IPR004977 -
Vium2720g00012 108 Gene3D - 21 108 - -
Vium2720g00012 108 MobiDBLite consensus disorder prediction 1 36 - -
Vium2720g00012 108 PANTHER 40S RIBOSOMAL PROTEIN S25 1 108 IPR004977 -
Vium2720g00012 108 FunFam 40S ribosomal protein S25 21 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2720g00012 Vium-Chr2720 57737 59317 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2720g00012 1 108 Cytoplasmic Ribosomal Protein Gene Family AT2G21580 89.815 1.21e-55 166