Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2707g00022 ATGGAAACGTGGTACATTGTCTCTGTTCTGTGTTTTTTCCTTTGGCTGATTCTCAAATCCATATGCAAAGTTCTCTTTCCTCCACTCCCTCCGGGACCTTCCAAATGCAACTTTGCATTGCTACGAGGATACTTCACTGACCCCAAAACCATTCTTCAAAAACTCGTTGCAAAATATGGTCCAATCTTCTCTGTTCATGTCGGTTATTCTCACACTGATATTTTCATCGCAAGTCGTTTCCTTGCACACCAAGCTTTGATCCAACATGGCACCATCTTCGCTGATCGCCCTAAGGCTAACCCCACCAACAAGGTTATAAGTAGCAACCAACATGACATTCTTTTCAGCTTCTATGGCCCCACATGGCGCCTCCTTAGGCGTAACCTCACTTCAAGAATCCTTCACCCCTTGCAGGTTAAGTTTTATGCACACGCACGCAAATGGGTCCTAGCGATGATCCTACAAGGCCTCATATCTGATTCTGAGGGTAACAGTCCCGTAAGGGTCATTGACCACTTTCAATATGGCATGTTTTCTTTGATGGTTTTGATGTGCTTTGGTGACAAACTCGATGAGAAGCAAATAAGGGAAATTGAGGACAGTCAACGTGACATGCTTGTGAGTTATGCTAGATACAGTATCTTGAACTTTTGGCCAACAGTTACTAGGATTTTGTTCTGGAAGAGGTGGAAGGAGTTCTTGCAGAAGCGGAGAGATCAAGATGCTGTGTTGATTCCTCACATCAATGCTCGAAGGAAGGCCAAGGAAGAGAGAGTGAGGAATGTCTCAAGTCAGTTGAGTGATTCTGCATTGTCATATGTGGACAGTTTGTTGGATTTGCAAATGTTGGAGTATGAGGAGGGGGTATATCTTGATGATGGTAAAATTTGCACCTTATGTTCGGAGTTTCTGAATGCTGGATCAGATACAACTTCAACTGCATTGGAGTGGATCATGGCAAATCTGGTGAAATGCCCCAAAATCCAAGAAAGTGTAGTGGGGGAAATTAGAAGGGTGATGGTTGGTAGAGAGGATAGGGAAGTGAAGGAGGAGGATTTGCACAAATTGCCTTATCTCAAGGCTGTGATTTTGGAGGGGTTGAGGCGTCACCCTCCGTTACACTTTGTGGCTCCTCACAGGGTAACTAAAGATGTTGTTTTAAATGGTTATTTGGTGCCTACCTATGCCTCAGTGAATTTCTTGGTGGCAGAGATAGGAAGGGACCCTACAGCTTGGGATGAGCCCATGGCCTTTAAGCCAGAGAGGTTCATGAACATTGGGGACCAGAATGGAGGCACAACTTTTGACATAATGGGAAGTAAAGAGATAAAGATGATGCCGTTTGGGGCAGGAAGGAGAATGTGTCCTGGCTATGCTTTGGCAATGTTGCACTTGGAGTACTTTGTGGCCAATTTTCTTTGGAATTTTGAGTGGAAGGTTGTGGATGGAGAGCATGTTGATCTTTCAGAGGAGCTGCAATTCACAACAGTAATGAAGAATCCTTTGAAGGTTCATATATTACCCAGGCAATAG 1533 0.4429 METWYIVSVLCFFLWLILKSICKVLFPPLPPGPSKCNFALLRGYFTDPKTILQKLVAKYGPIFSVHVGYSHTDIFIASRFLAHQALIQHGTIFADRPKANPTNKVISSNQHDILFSFYGPTWRLLRRNLTSRILHPLQVKFYAHARKWVLAMILQGLISDSEGNSPVRVIDHFQYGMFSLMVLMCFGDKLDEKQIREIEDSQRDMLVSYARYSILNFWPTVTRILFWKRWKEFLQKRRDQDAVLIPHINARRKAKEERVRNVSSQLSDSALSYVDSLLDLQMLEYEEGVYLDDGKICTLCSEFLNAGSDTTSTALEWIMANLVKCPKIQESVVGEIRRVMVGREDREVKEEDLHKLPYLKAVILEGLRRHPPLHFVAPHRVTKDVVLNGYLVPTYASVNFLVAEIGRDPTAWDEPMAFKPERFMNIGDQNGGTTFDIMGSKEIKMMPFGAGRRMCPGYALAMLHLEYFVANFLWNFEWKVVDGEHVDLSEELQFTTVMKNPLKVHILPRQ 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2707g00022 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 448 457 IPR017972 GO:0005506|GO:0016705
Vium2707g00022 510 Gene3D Cytochrome P450 25 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2707g00022 510 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2707g00022 510 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2707g00022 510 PRINTS E-class P450 group I signature 176 194 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2707g00022 510 PRINTS E-class P450 group I signature 445 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2707g00022 510 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2707g00022 510 PRINTS E-class P450 group I signature 56 75 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2707g00022 510 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2707g00022 510 PRINTS E-class P450 group I signature 455 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2707g00022 510 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 10 502 - -
Vium2707g00022 510 CDD CYP77_89 58 503 - -
Vium2707g00022 510 Pfam Cytochrome P450 28 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2707g00022 510 FunFam Cytochrome P450 family protein 23 510 - -
Vium2707g00022 510 SUPERFAMILY Cytochrome P450 26 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2707g00022 510 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2707g00022 510 PRINTS P450 superfamily signature 446 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2707g00022 510 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2707g00022 510 PRINTS P450 superfamily signature 455 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2707g00022 Vium-Chr2707 109881 111996 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2707g00022 28 510 Cytochrome P450 AT1G64940 53.265 0.0 521
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2707g00022 K24184 - gmx:100816275 878.241