Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2705g00003 ATGGCTCTGTTGTATTTTGCTTTGGTCATTCTGCTCTTTCTCTTTTCTCTTAAGCTCTTGTTCCAAACAAGAAAATTTAGAAACCTTCCTCCAGGGCCAATTTCTTACCCTATAATCGGAAACCTCTTCCAACTCAAACAGCCTTTCCATCGCACATTCACTCAAATGTCGCAAAAATACGGTCCAGTCTTCTCTCTCTGGTTCGGTTCCCGACTCGTTGTCGTCGTTTGTTCACAATCCGCGGTGCAAGAATGCTTCACCAAAAACGACATCGTGTTGGCGAACCGACCTCACTTTCTGTTTGGCAAATACATCAGCTACAATAACAGCACCATCCTTCACTCCTCCTACGGCGACCACTGGCGCCACCTCCGCCGCATCTTGTCGCTGGAGGTTGTCTCAACGAACCGTTTAAACTCCTTCTACGAGGTCCGAAGGGACGAGATCATGAGGCTGGTGCAAAAGCTCGCTAACCTCTCATCGAACCACTTCACCAAAGTGGATCTAAAAGCCATGTTTATGGAAATGTCATTTAATACTATGATGAGAATCGTGTCTGGAAAGAGACTCTTTGGTGATGATTGTGATGTGAATGATGTGGAGAAAGCAAAAGAATTCCAAGGTATCATCAAAGAATTAGTGATACTAGCAGGAGTTAATAACCGTGGAGATTTCTTACCTTTTGTGAGATGGTTTGATTTTGATAATTTGGAGATGAAGTTAAAAGGAATTGGTAAGAGAACCGATGCATTTTTACAAGAACTCATCGAAGAGCATCGTAATGGAAATAACAATGGAAATACTATGATAGATCATCTTCTTGCTCAACAACAATCACAACCTGAACAATACACCGACCAAATCATCAAAGGACTTTCTTTGAGTTTGTTACTTGCCGGAACAGATACATCAGCTTTAACTTTAGAATGGACAATGGCTAATTTATTGAACCATCCAGAAGTTATAAAGAAGGCAAAAAATGAAATAGACACTCATGTAGGATCTAATCATCTTGTAGAGGAATCTGACATGTCAAAACTTCCTTACATTCAATGCATTGTTTATGAGACGCTACGATTGCATCCTGCTGCTCCAATTTGGTCACCACATTTATCTTCAGAAGATTGCACCGTAGGAAAATATAATCTCCCAAAAGACACAATTGTGTTGGTGAATGCCTGGTCTGCTCATATGGATCCAAAAATGTGGATTGACCCTACGCACTTTAAGCCTGAAAGGTTTGAAAACGAAAATGAAATAAACAGGTTACTTTCATTTGGGTTAGGACGGAGGGCTTGTCCGGGATCAAACTTGGCTCAACGGACAGTTGGTTTATCCATAGCTTTATTACTTCAATGTTTTGAGTGGAAACGAATTGGTAAGGAAAAAATTGATATGTCTGAAGCAAATGGTATTACTATTTCGAGAAAAAATCCATTGGAAGCTATGTGTCAACTTCGTCAATCACCAGCATAA 1476 0.4045 MALLYFALVILLFLFSLKLLFQTRKFRNLPPGPISYPIIGNLFQLKQPFHRTFTQMSQKYGPVFSLWFGSRLVVVVCSQSAVQECFTKNDIVLANRPHFLFGKYISYNNSTILHSSYGDHWRHLRRILSLEVVSTNRLNSFYEVRRDEIMRLVQKLANLSSNHFTKVDLKAMFMEMSFNTMMRIVSGKRLFGDDCDVNDVEKAKEFQGIIKELVILAGVNNRGDFLPFVRWFDFDNLEMKLKGIGKRTDAFLQELIEEHRNGNNNGNTMIDHLLAQQQSQPEQYTDQIIKGLSLSLLLAGTDTSALTLEWTMANLLNHPEVIKKAKNEIDTHVGSNHLVEESDMSKLPYIQCIVYETLRLHPAAPIWSPHLSSEDCTVGKYNLPKDTIVLVNAWSAHMDPKMWIDPTHFKPERFENENEINRLLSFGLGRRACPGSNLAQRTVGLSIALLLQCFEWKRIGKEKIDMSEANGITISRKNPLEAMCQLRQSPA 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2705g00003 491 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 426 435 IPR017972 GO:0005506|GO:0016705
Vium2705g00003 491 Gene3D Cytochrome P450 22 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2705g00003 491 FunFam Cytochrome P450 family protein 21 489 - -
Vium2705g00003 491 PRINTS E-class P450 group I signature 57 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2705g00003 491 PRINTS E-class P450 group I signature 288 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2705g00003 491 PRINTS E-class P450 group I signature 81 102 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2705g00003 491 PRINTS E-class P450 group I signature 176 194 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2705g00003 491 PRINTS E-class P450 group I signature 351 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2705g00003 491 PRINTS E-class P450 group I signature 392 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2705g00003 491 PRINTS E-class P450 group I signature 423 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2705g00003 491 PRINTS E-class P450 group I signature 308 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2705g00003 491 PRINTS E-class P450 group I signature 433 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2705g00003 491 PRINTS P450 superfamily signature 424 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2705g00003 491 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2705g00003 491 PRINTS P450 superfamily signature 433 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2705g00003 491 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2705g00003 491 Pfam Cytochrome P450 30 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2705g00003 491 CDD CYP81 61 480 - -
Vium2705g00003 491 PANTHER CYTOCHROME P450 82C3-RELATED 8 488 - -
Vium2705g00003 491 SUPERFAMILY Cytochrome P450 30 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2705g00003 Vium-Chr2705 35055 37434 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2705g00003 2 489 Cytochrome P450 AT4G37370 50.916 0.0 524