Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2697g00002 ATGGGAGTCTTCACATTTATCGTACGCAACTCCGGCGGCGAATGGACAGCCAAACAACATTCGGGCGACCTCGAGTCCTCCGCCGACTCCTCCTACGAACTCCAACGGAAGCTTGTCCAAGCCGCTCTCGCCGTTGACTCCTCCGGCGGCGTTCAGTCCTCTTACTCTCCTGTTTCCCCTTCCTCTGCCATATTTCAGGTAATAGTGGGTGGTGCAGTATTTGTTGGAGGTGGTGCGGTTGCAGCTGCACCTGCCGGAAGTGCTGCCCCAGCTGCTGATGCTGCCCCGGCCGCTGAGAAGAAGGAAGAAAAGGTGGAGGAAGAGTCCGACGAGGATATGGGTTTGGGTCTGTTTGATTAG 360 0.5667 MGVFTFIVRNSGGEWTAKQHSGDLESSADSSYELQRKLVQAALAVDSSGGVQSSYSPVSPSSAIFQVIVGGAVFVGGGAVAAAPAGSAAPAADAAPAAEKKEEKVEEESDEDMGLGLFD 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2697g00002 119 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P3-1-RELATED 1 119 IPR044252 GO:0003735|GO:0005840
Vium2697g00002 119 MobiDBLite consensus disorder prediction 86 119 - -
Vium2697g00002 119 MobiDBLite consensus disorder prediction 105 119 - -
Vium2697g00002 119 Pfam 60s Acidic ribosomal protein 68 118 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2697g00002 1 69 Cytoplasmic Ribosomal Protein Gene Family AT4G25890 73.913 7.50e-33 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2697g00002 K02942 - gmx:100527385 116.316