Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2676g00004 ATGGAGTACCTTCTTGAACTTCTTCAAATCACCATAGTGTGTGTAACCATTCATTTACTCATCTCAACCTTCAAACCAATGAAAACCTCAAAGTACCCTCCAGGGCCTCACCCTTTTCCCATCATAGGAAATATCTTGGAGCTTGGAAACCTGCCACACCAAGCACTTGCCAAGCTTTCTCAAATTTATGGTCCTATTATGAGTCTCAAGCTTGGTAGCATTACCACCATAGTCATTTCCTCTCCACATCTTGCCAGAGAAGTACTGCAAACAAAAGATCAAATCTTTTCCAACAGAAAAATCCCAGATACTCTTCGAGCTCTTGATCATCACATACTTTCAATGGCATGGATGCCACCTTCAGCACTGTGGAGGACCCTTAGGAGAGCGTGTGCCACCAAAGTGTTCTCTTCTCGGCAGCTTGATTCCACACAAGTTGGTCGAGAGAGGAAGGTGCAAGAATTGATGGATTATGTCAAGGAAAAATGTCAGAAAGGTGAAGCCTTAGATATTGGTGAGGCTTCCTTCACAACTGTGCTTAATTCCATATCAAACACTTTCTTCTCAATGGATTTAGCTCATTACGCTTCTGACAATTCTCAAGAGTTCAAGGACATCATTTGGGGCATCATGGAAGAAGCTGGAAGGCCTAATGTTGTTGACTTTTTTCCAATCTTTCGCATGCTTGATCCACAGGGTGTTCGGAGAAGAATGAATGGTTACTTTGAAAAGTTAATAGCGTTTTTTGATGGACTAATAGAAGAAAGATTGCGTTTAAGGGCATTAGAAAATGAAGCCAAGGCATGCAAGGACGTGTTGGATTCTGTGTTGGAACTCATGCTTGAAGACAATTCACAAGTGACTCGCCCTCATGTTCTGCATTTGTTTCTGGATTTATTTGTGGCTGGAGTAGACACAACATCAAGCTCTATAGAATGGGCTATGGCTGAGTTGCTACGTAACCCAGAAAAGCTAGAAAAAGTGAGGGAAGAGCTTCACCAAGTCCTTGTCAAAGGTGAGCAACTAGAAGAATCACATATCTCAAAGCTTCCTTACCTACAAGCAGTGGTGAAGGAAACTTTCCGCTTGCATCCACCTGTTCCAATGTTAGTGCCACACAAGCCAGAAGTTGATGTTGAACTATGTGACTTCATGGTACCTAAAAGTTCCCAAATTTTCATTAATGTATGGGGCATGGGTAGAGATTCAAATATTTGGACAAACCCAGATGAATTCAAACCTGAAAGATTCTTGGAAAGTGACCTTGATTTTAAAGGCCAAGATTTTGAACTAATACCCTTTGGAGCAGGAAGAAGGATCTGTCCTGGATTGCCATTGGCTTCCAGAACTGTGCATATTGTATTGGCCTCTCTTCTATGTAAGTATAATTGGAAGCTCAAAGATGGACAAAAGCCACAAGACATGGATATATCTGAGAAATATGGGATTACGTTGCATAAGGCACAACCTCTCCTAGTCATTCCAATCCAAGCATGA 1497 0.4168 MEYLLELLQITIVCVTIHLLISTFKPMKTSKYPPGPHPFPIIGNILELGNLPHQALAKLSQIYGPIMSLKLGSITTIVISSPHLAREVLQTKDQIFSNRKIPDTLRALDHHILSMAWMPPSALWRTLRRACATKVFSSRQLDSTQVGRERKVQELMDYVKEKCQKGEALDIGEASFTTVLNSISNTFFSMDLAHYASDNSQEFKDIIWGIMEEAGRPNVVDFFPIFRMLDPQGVRRRMNGYFEKLIAFFDGLIEERLRLRALENEAKACKDVLDSVLELMLEDNSQVTRPHVLHLFLDLFVAGVDTTSSSIEWAMAELLRNPEKLEKVREELHQVLVKGEQLEESHISKLPYLQAVVKETFRLHPPVPMLVPHKPEVDVELCDFMVPKSSQIFINVWGMGRDSNIWTNPDEFKPERFLESDLDFKGQDFELIPFGAGRRICPGLPLASRTVHIVLASLLCKYNWKLKDGQKPQDMDISEKYGITLHKAQPLLVIPIQA 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2676g00004 498 Gene3D Cytochrome P450 23 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2676g00004 498 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2676g00004 498 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2676g00004 498 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2676g00004 498 PRINTS P450 superfamily signature 441 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2676g00004 498 CDD CYP76-like 60 495 - -
Vium2676g00004 498 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 12 497 - -
Vium2676g00004 498 Pfam Cytochrome P450 33 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2676g00004 498 SUPERFAMILY Cytochrome P450 33 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2676g00004 498 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2676g00004 498 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2676g00004 498 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2676g00004 498 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2676g00004 498 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2676g00004 498 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2676g00004 498 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2676g00004 498 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2676g00004 498 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Vium2676g00004 498 Coils Coil 325 345 - -
Vium2676g00004 498 FunFam Cytochrome P450 76C4 25 494 - -
Vium2676g00004 498 Coils Coil 252 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2676g00004 Vium-Chr2676 65567 67262 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2676g00004 28 497 Cytochrome P450 AT2G45550 49.894 3.01e-176 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2676g00004 - - gmx:100809483 858.596