Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2676g00003 ATGGAGTACCTTCTTCCACTTCTTCAGATCACCATAGTGTGTGTAACCATTTATGTACTCATCTCAAGCTTCAAACCAATGAAAACATCAAAATACCCTCCAGGGCCTCACCCTTTTCCCATCATAGGAAACATCCTGGAGCTTGGAAATCAGCCTCACCAAGCACTTGCCAAACTTTCTCAAATTTATGGTCCTATTATGAGTCTCAAGCTTGGTAGCACTACCACCATCGTCATTTCATCTCCACATGTTGCCAAAGAAGTACTGCAAAAACATGATCAAATCTTTTCCAACAGGACAATCCCAGATACTCTTCGAGCTCTTGATCATCACATACTTTCAGTGGTGTGGATGCCACCTTCAGCACTGTGGAGGACCCTTAGGAGAGCTTGTGCCACCAAAGTGTTCTCTTCTCAGCAGCTTGATTCCACGCAAGTTTGTCGACAGAGGAAGGTGCAAGAATTGATGGATTATGTCAAGGAAAGNTCTCTTACCAATGAAGGACTTTGTTTGTACCCAACATGA 525 0.4343 MEYLLPLLQITIVCVTIYVLISSFKPMKTSKYPPGPHPFPIIGNILELGNQPHQALAKLSQIYGPIMSLKLGSTTTIVISSPHVAKEVLQKHDQIFSNRTIPDTLRALDHHILSVVWMPPSALWRTLRRACATKVFSSQQLDSTQVCRQRKVQELMDYVKEXSLTNEGLCLYPT 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2676g00003 174 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2676g00003 174 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2676g00003 174 PANTHER CYTOCHROME P450 FAMILY 1 11 161 - -
Vium2676g00003 174 Pfam Cytochrome P450 33 166 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2676g00003 174 SUPERFAMILY Cytochrome P450 28 162 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2676g00003 174 Gene3D Cytochrome P450 22 173 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2676g00003 Vium-Chr2676 22640 23303 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2676g00003 2 169 Cytochrome P450 AT2G45560 42.353 8.63e-44 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2676g00003 - K23810 gmx:100809483 277.33