Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2671g00013 ATGGAGTTTGAGATTGATGGTACTGGCGAGACAGTAGCAAATGCTGCTATAGATGAGATTAGTAGCGTGGCTGATGACAACAGAGAAGGTGAATCTATCGAACCAAATTACAAACAAGATGAAGGTGATAATCTTGCTCAAGATTCCTCTGGGATCACAATCCCATTTGCAATTCCCACAGTATCAGTTGTTGCAGTTGAAGAGCCGTATGTGGGTCAGGAATTTGAGTCAGAATCAGCAGCACAGGCATTTTACAATGCATATGCCACAGATGTTGGATTCATCGTGCGTGTGAGTAAACTGTCGCGATCAAGGCGTGATGGAACTGCCATTGGACGTGCTCTTGTTTGCAACAAAGAAGGTTTCAGAATGCCTGACAAGCGTGAGAAGATTGTGAGGCAAAGGGCTGAGACCAGGGTCGGTTGCCGGGCAATGATTATGGTGAGGAAAGTTAGTTCTGGCAAATGGGTTGTTACAAAGCTTGTAAAGGAACATACACATCCTTTGACTCCTGGTAAAGGAAGAAGGGATTTCGTTTATGAACAATATCCGAATGAACATGACAAAATTCGGGAACTATCTCAGCAGTTGGCATGTGAGAAAAAGCGATCTGCAACCTATAAAAGACATCTTGAACTGATATTTGAGCACATTGAAGAGCATAACGAGAGTCTTTCAAAGAAAATACAGCACATAGTAGACAGTGTGAGGGAGATGGAAACCAAAGAACAACAGAGTCAACTCTAA 747 0.4284 MEFEIDGTGETVANAAIDEISSVADDNREGESIEPNYKQDEGDNLAQDSSGITIPFAIPTVSVVAVEEPYVGQEFESESAAQAFYNAYATDVGFIVRVSKLSRSRRDGTAIGRALVCNKEGFRMPDKREKIVRQRAETRVGCRAMIMVRKVSSGKWVVTKLVKEHTHPLTPGKGRRDFVYEQYPNEHDKIRELSQQLACEKKRSATYKRHLELIFEHIEEHNESLSKKIQHIVDSVREMETKEQQSQL 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2671g00013 248 MobiDBLite consensus disorder prediction 16 49 - -
Vium2671g00013 248 Pfam FAR1 DNA-binding domain 84 170 IPR004330 -
Vium2671g00013 248 MobiDBLite consensus disorder prediction 22 38 - -
Vium2671g00013 248 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 27 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2671g00013 Vium-Chr2671 54365 56835 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vium2671g00013 FAR1 1.7e-30 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2671g00013 - - var:108338935 482.641