Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2667g00001 TGTGATGGATCAATTTTGCTGAACCATCTAGGGAGTGAGAGGACTGCTTTGGAGAGCAAAACCCTCAGAGGGTTCCAATTGATTGATGATATCAAGGCTGAGTTGGAGAGGAAGTGTCCAAAAACAGTCTCTTGTGCTGATATTCTCACTGCTGCTGCAAGAGATGCCACTCTTTTGGTTGGAGGACCATTCTGGGAAGTTCCATTTGGCCGCAAAGATGGCAAGATTTCCTTATCAACAGAAGCCAATTTGGTTCCCCATGGCCATGAAAACATCACAGCTCTTATTGCATTCTTCCAAGAAAAGGGGTTAGACATTCTTGACTTGGTCACACTCTCAGGTTCACACACAATTGGGAGGAGCACTTGCTCTTCTGTTATGGACAGGATTTACAATTTCAATGGGACTCAAAAGCCTGACCCCTCAATCAACGTGTATTTCTTGAAATTGTTGAGGAAGAGGTGTAAATCAGAGTTGGATTTGGTGCACCTTGATGTTTTAACCCCTAGAACTTTTGACACAATCTATTATACAAACCTTATGAGGAAGGTGGGGTTGTTGTCAACAGATCAGTCTCTCTTTTCAGATGCAAGGACAGCTCCTTTTGTTGAAGCATTTGCAACACAACCTTTCCTTTTCACTAGCCAGTTTTCAGTGTCAATGGTGAAACTTGGGAATGTTCAAGTTTTGACTAGGCCTAGTGAAGGTGAAATAAGGGTTAATTGTAATCGTGTCAATACTGTCTAA 747 0.423 CDGSILLNHLGSERTALESKTLRGFQLIDDIKAELERKCPKTVSCADILTAAARDATLLVGGPFWEVPFGRKDGKISLSTEANLVPHGHENITALIAFFQEKGLDILDLVTLSGSHTIGRSTCSSVMDRIYNFNGTQKPDPSINVYFLKLLRKRCKSELDLVHLDVLTPRTFDTIYYTNLMRKVGLLSTDQSLFSDARTAPFVEAFATQPFLFTSQFSVSMVKLGNVQVLTRPSEGEIRVNCNRVNTV 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2667g00001 248 Gene3D Peroxidase, domain 2 86 224 - -
Vium2667g00001 248 PANTHER PEROXIDASE 25-RELATED 1 239 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium2667g00001 248 ProSitePatterns Peroxidases proximal heme-ligand signature. 108 118 IPR019793 -
Vium2667g00001 248 SUPERFAMILY Heme-dependent peroxidases 1 246 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vium2667g00001 248 PRINTS Haem peroxidase superfamily signature 43 60 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium2667g00001 248 PRINTS Haem peroxidase superfamily signature 61 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium2667g00001 248 PRINTS Haem peroxidase superfamily signature 165 180 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium2667g00001 248 PRINTS Haem peroxidase superfamily signature 108 123 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium2667g00001 248 CDD secretory_peroxidase 1 245 IPR033905 GO:0004601|GO:0042744
Vium2667g00001 248 FunFam Peroxidase 86 224 - -
Vium2667g00001 248 Pfam Peroxidase 1 208 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium2667g00001 248 ProSiteProfiles Plant heme peroxidase family profile. 1 246 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium2667g00001 248 Gene3D - 1 246 - -
Vium2667g00001 248 PRINTS Plant peroxidase signature 23 36 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium2667g00001 248 PRINTS Plant peroxidase signature 61 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium2667g00001 248 PRINTS Plant peroxidase signature 107 119 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium2667g00001 248 PRINTS Plant peroxidase signature 163 178 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium2667g00001 248 PRINTS Plant peroxidase signature 42 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium2667g00001 248 PRINTS Plant peroxidase signature 219 232 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium2667g00001 248 PRINTS Plant peroxidase signature 179 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2667g00001 Vium-Chr2667 6 934 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2667g00001 1 247 Peroxidase AT1G30870 51.004 2.19e-89 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2667g00001 K00430 - gmx:100792775 457.603