LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vium2666g00001	ATGGGAACTCCAGTATTCCTTCGAAGATGCTTGCGCCACAAGGTACAGGAGAAGCAAAACAAGAGAATACAAATGACAGTTTGCTTAAAGAAGGTTTTCAATAATGGCAAAAGTGTCTTTCCTATGTATGTCTGTCTGGCTAGGAGGGCTCCTAATAGTGGAGTTTCAATGGATACTGTTGTTTATCAAATTGGCCGGATTTTCATCTTCCGAAATTCCCGTGAAGTTGATTGGAATTCTGAAGTCCAAGTAAAGTTTACACTCCCAGAATTGAATAAGTTAGCCAAGGAAGCTAAATCTGACACAATTGATCTCTTGTTTGTCAGCGCAGCCACTGTAGAGGACTCAAGTTTATCAAATGGAGCTAATTCAAACTCGTCGCCTTTGGATCCGAATCATCTGCCTCTTGGTGAATCTGGAGAGTACTGTCTTCTGGCGAAAGCAACTTTAGAATCAATTTATATGGCTTGGAATCATCTTCCTACTTTTCGTTTGGGAAACCGAACTGAGATTTGCACAACTTTGGATTTGTTTCCATGTATTCTGAAGTCGGATTTTCAAAATCAGGGTGAAAAAGTCTCCATTCAACGTCCATCTGATGACAAGAATATGAGCATATCAGAGATGCATATCTCAATTTCTGCTGAAGAGTTTGGGTCCAAAGAGAAATATTCCAGGCCTTTCCTGCACCTATAG	696	0.4037	MGTPVFLRRCLRHKVQEKQNKRIQMTVCLKKVFNNGKSVFPMYVCLARRAPNSGVSMDTVVYQIGRIFIFRNSREVDWNSEVQVKFTLPELNKLAKEAKSDTIDLLFVSAATVEDSSLSNGANSNSSPLDPNHLPLGESGEYCLLAKATLESIYMAWNHLPTFRLGNRTEICTTLDLFPCILKSDFQNQGEKVSIQRPSDDKNMSISEMHISISAEEFGSKEKYSRPFLHL	231

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vium2666g00001	231	PANTHER	POLYCOMB GROUP PROTEIN	3	223	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vium2666g00001	Vium-Chr2666	20338	24220	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vium2666g00001	4	223	C2H2 Transcription Factor Family	AT5G51230	35.714	1.35e-39	142

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vium2666g00001	-		-	var:108325561	443.351