Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2664g00010 ATGTATCAGTGTAGTTCCCAAATGTACGGAACTGATTGGGAATACATGGGGATTAGCAACCTAGCCAAGGTTGTTGGATCAGACCAAATGAGTGTTCTTGAGCCAAAAAGCTCACCTTTCAACATTGTCACCACTCCTCTTCAAATTCAAACCCCACAAGGCTTTTGTGCAACTGCAACAAAAGGGCTTGTGAGTTTTCAAGCTCAACAACATGCTCATCATCAGCATCAGATCGAAGTTCCTGCTTGGTGCTTTGACTCTAACATGCTGAATATTTGCCAAGCCTCTGGGGATAACTTTACCACCAAACAAGATCCACCCTCGTCTCAATTCACAAGCTCCTTGTGCCCGGTTGCTGAATCTTTCTTGTCGTCCAGCACTGGTGCAGATTGTCCTTCTTCTTCTGAAAAATATTGTAAAATTACTTCCTATTCTGAAAAACATAGCAGCATGCAGCCTGATGGTATGCCATATTACGATCACTTTTCCCAAGAAGAAGATAAATTACTCAGAGATGATGCTGCCACGGATGAAAGGCCCCTTGAAATTTCCTTTCAGAGAAACCAGTTGGAATCATGTACAAAGCCACAAAAGCAAGCTCCTCATAGACTTTGTGGGGTTGCCTGTGTAACTTCTAGCAACTCTGCTTCTAGAAGAGGCAAAAGAAGAATAAAATGGACCGACGATCTACACGAGCCATTTATGATGATTGTTAACAGTCTTGGTGGTCCAGAAAAGGCAAAACCTAAGGCTATACTAGATATGATGAAATCAGATTTGCTGTCCATTTCTCATGTTAAAAGTCACTTACAGAAGTGTAGGTCTACAATAAACATGCACAAAGCTTTGCAGGAAAAATCCGAGGAAGGACAGAGAATGGATGGGGTGGCTGAGCTTCAAGTGAAAATCCACATGCAAATTGAGGAATCAAGGCAACTGCAACTAGAGGTTCGGAGGAATATCTGCCAACAACTAGAGATGCAACGAAATCTCCAAATGCTAATTCAACAGCAGAGCCAGCAACTCAAAGTAATGTTTGATTACCAAAAGAAAAAACCCAAACTGGACACAGAACTCGAAGCAACTGTCCCCTAA 1095 0.4219 MYQCSSQMYGTDWEYMGISNLAKVVGSDQMSVLEPKSSPFNIVTTPLQIQTPQGFCATATKGLVSFQAQQHAHHQHQIEVPAWCFDSNMLNICQASGDNFTTKQDPPSSQFTSSLCPVAESFLSSSTGADCPSSSEKYCKITSYSEKHSSMQPDGMPYYDHFSQEEDKLLRDDAATDERPLEISFQRNQLESCTKPQKQAPHRLCGVACVTSSNSASRRGKRRIKWTDDLHEPFMMIVNSLGGPEKAKPKAILDMMKSDLLSISHVKSHLQKCRSTINMHKALQEKSEEGQRMDGVAELQVKIHMQIEESRQLQLEVRRNICQQLEMQRNLQMLIQQQSQQLKVMFDYQKKKPKLDTELEATVP 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2664g00010 364 Gene3D - 220 277 - -
Vium2664g00010 364 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 212 351 IPR044848 GO:0003700
Vium2664g00010 364 NCBIfam myb-like DNA-binding domain, SHAQKYF class 221 275 IPR006447 GO:0003677
Vium2664g00010 364 SUPERFAMILY Homeodomain-like 220 277 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2664g00010 Vium-Chr2664 89053 91560 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2664g00010 208 349 G2-like Transcription Factor Family AT4G28610 43.919 1.17e-30 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Vium2664g00010 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2664g00010 - - var:108322231 573.548