Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2664g00007 ATGATCAACGTGAAACGCGAACTGGACGGTGATGGTGATTGCAGTAGCATCGACAAGCGTGATTCTGAACTCCACGCCGTAAGCGACGACGCTGATTACAAAACTCGGAAACGCCGTCGAGGTATTCGTTCTCGGTATCTGGTCTTCAAGAACATGATTCAAGATGAAAGGGAAGAAATTGCTAGGCCTGATTCTAACAAGTTCGATTTGATCTTTAGTGAAATGGAGAGCTTACATCAGCAAGTTACAAAACCAAGAGAACAAGTAGCTGACGCAAAGGCTCTTTTGGAAATCACCCAATCCCTGGTAATGTCTGTGAGAACTACTGCGAATGGCGGACTAACTCCTTCAGACTTTGTTACACACATTCTTAAAAAGTTCGGAGGACATGTTGGACCAAGTAATAGCACAGAAGATTGCAGTAGAAATTCAGTAGCTTGGAATGATATTGGAGTTGCGGTGTCACATGTTTTTAGAGCAGGTTATGGGTGCTGTACAATGATGGCCCCAATGGATGCTAAAATAGAGCAGAGGAAGGTCATTAATCGTCGAAAGCGTGTGAGACCAACTGAATTGGCACGGCCTGAAGAGCTATGTGGAGGTTCAGGGGAAGAGATAGCGGAGACCGATAAGCATATGTTAACGATGTTTAACATCTTAAGGATCAATAAAGTTGTCAAGCTTGAAAATCTGGTTTTGAATCGGAACTCATTTGGACAAACCGTGGAGAATTTATTTGCTTTATCCTTTTTAGTCCGAGATGGTCGGGCTGAAATAAAAGTTAACGAGTCTGGATGGCAACTAGTTTCGCCTAGGAACGCTCCTGCTGCAAATTCAGTTGTTTCTGGGGATGTTGCTTTTAGCCATTTTGTTTTCCGATTTGACTTCAACGATTGGAAGTTGATGGTTGGCACTGTTAGGGTTGGAGAGGAGCTGATGCCTCATAGGAACAGTGAATCACAGAGATAG 969 0.4355 MINVKRELDGDGDCSSIDKRDSELHAVSDDADYKTRKRRRGIRSRYLVFKNMIQDEREEIARPDSNKFDLIFSEMESLHQQVTKPREQVADAKALLEITQSLVMSVRTTANGGLTPSDFVTHILKKFGGHVGPSNSTEDCSRNSVAWNDIGVAVSHVFRAGYGCCTMMAPMDAKIEQRKVINRRKRVRPTELARPEELCGGSGEEIAETDKHMLTMFNILRINKVVKLENLVLNRNSFGQTVENLFALSFLVRDGRAEIKVNESGWQLVSPRNAPAANSVVSGDVAFSHFVFRFDFNDWKLMVGTVRVGEELMPHRNSESQR 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2664g00007 322 PANTHER UNCHARACTERIZED 31 321 IPR027786 GO:0005634|GO:0006281|GO:0030915
Vium2664g00007 322 Pfam Nse4 C-terminal 226 313 IPR014854 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2664g00007 Vium-Chr2664 50999 54828 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2664g00007 39 318 Non-SMC Element family AT1G51130 50.890 1.08e-96 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2664g00007 K22825 - gmx:100781485 478.018