Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2663g00020 ATGAATTTCAAGAGCTTCGGGAATGAAGCTGGTGGCGACGGAGGAGGGAGGCCGGTGGGGAACTTCTCCCTCACGCGGCAGCCGTCGGTGTACTCGCTGACGTTCGACGAGTTCATGAACAGCATGGGAGGTTCCGGGAAGGACTTTGGCTCCATGAACATGGACGAGTTGCTCAAGAACATTTGGACGGCGGAGGAGGTTCAGACAATGGCTTCGGCGGGCGTTGCCACCGAGGACGTAGGAGCCGGCGTCAGCCATTTGCAACGGCAGGGGTCGCTGACACTGCCGCGAACTCTGAGCCAGAAGACAGTGGATGAGGTTTGGAAGGACATTTCGAAGGATTACGGTGGGCACGGAGGGCCCAATCTTGCACAGACGCCGAGACAGCCCACTCTGGGAGAGATGACTTTGGAGGAGTTTCTGGTCAGAGCTGGTGTTGTTAGAGAAGATGCGAAGCCAAACGACGGCGTTTTCATGGATCTGGCTCGTGCGGGGAATAACAACGGTTTGGGGTTTGGGTTCCAGCAGATGAACAAGGTTTCTACTGCTACCGGTTTGATGGGTAACCGGTTGAACAATGATCCACTGGTGGGTCTTCAGTCTTCTGCCAATTTGCCTTTGAGTGTTAATGGGGTGAGATCGTCCAGTCAGCAGCCACAGATGCAGAGTCCACAGTCTCAGCAACAGCATCAGCAGCAGATATTTCCTAAGCAGAGTCCTATGTCTTATGCAGCTGCTCAGATGCCCCAGGGAATGGTTAGAGGTGGGATTGTGGGACTCGGTGGTGATCAGGGTTTGAGCGTGCAAGGTGGAGGGATTGGTAGGGTTGGTTTGGCACCTGGGTCAGTTCATGTTACTACTGGGTCTCCTGCTGCTAACCAAATATCCGGTGATAAGATGACCAAGAGCAATGGTGATACCTCGTCTGTCTCACCGGTTCCTTATGTCTTTAACGGAGGCATGCGGGGGAGGAAGACTGGAGGAGCTGTGGAGAAGGTGATAGAGAGGAGGCAGAGAAGGATGATAAAGAACAGAGAGTCAGCTGCCAGGTCACGGGCACGCAAGCAGGTGAATATTTGTTCCACTATCCTAAATTTAGCAATCATAGTTCTCTTGCATTTGTATATTCAAAGGAACAATTACTTAAATGCAAAAAGATATCAATGGGTTGATGCAATCACTTTAAACATGTACATAGGCATGTTTGAGTAA 1212 0.5149 MNFKSFGNEAGGDGGGRPVGNFSLTRQPSVYSLTFDEFMNSMGGSGKDFGSMNMDELLKNIWTAEEVQTMASAGVATEDVGAGVSHLQRQGSLTLPRTLSQKTVDEVWKDISKDYGGHGGPNLAQTPRQPTLGEMTLEEFLVRAGVVREDAKPNDGVFMDLARAGNNNGLGFGFQQMNKVSTATGLMGNRLNNDPLVGLQSSANLPLSVNGVRSSSQQPQMQSPQSQQQHQQQIFPKQSPMSYAAAQMPQGMVRGGIVGLGGDQGLSVQGGGIGRVGLAPGSVHVTTGSPAANQISGDKMTKSNGDTSSVSPVPYVFNGGMRGRKTGGAVEKVIERRQRRMIKNRESAARSRARKQVNICSTILNLAIIVLLHLYIQRNNYLNAKRYQWVDAITLNMYIGMFE 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2663g00020 403 MobiDBLite consensus disorder prediction 288 309 - -
Vium2663g00020 403 SUPERFAMILY Leucine zipper domain 336 358 IPR046347 GO:0003700|GO:0006355
Vium2663g00020 403 CDD bZIP_plant_BZIP46 336 367 - -
Vium2663g00020 403 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 24 357 IPR043452 GO:0003700|GO:0045893
Vium2663g00020 403 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 339 354 IPR004827 GO:0003700|GO:0006355
Vium2663g00020 403 Gene3D - 334 361 - -
Vium2663g00020 403 MobiDBLite consensus disorder prediction 207 238 - -
Vium2663g00020 403 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2663g00020 Vium-Chr2663 161924 163918 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2663g00020 24 382 bZIP Transcription Factor Family AT1G45249 52.208 5.67e-92 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2663g00020 K14432 - gmx:100819313 541.962