Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2663g00018 ATGAATTTCAAGAGCTTCGGGAATGAAGCTGGTGGCGACGGAGGAGGGAGGCCGGTGGGGAACTTCTCCCTCACGCGGCAGCCGTCGGTGTACTCGCTGACGTTCGACGAGTTCATGAACAGCATGGGAGGTTCCGGGAAGGACTTTGGCTCCATGAACATGGACGAGTTGCTCAAGAACATTTGGACGGCGGAGGAGGTTCAGACAATGGCTTCGGCGGGCGTTGCCACCGAGGACGTAGGAGCCGGCGTCAGCCATTTGCAACGGCAGGGGTCGCTGACACTGCCGCGAACTCTGAGCCAGAAGACAGTGGATGAGGTTTGGAAGGACATTTCGAAGGATTACGGTGGGCACGGAGGGCCCAATCTTGCACAGACGCCGAGACAGCCCACTCTGGGAGAGATGACTTTGGAGGAGTTTCTGGTCAGAGCTGGTGTTGTTAGAGAAGATGCGAAGCCAAACGACGGCGTTTTCATGGATCTGGCTCGTGCGGGGAATAACAACGGTTTGGGGTTTGGGTTCCAGCAGATGAACAAGGTTTCTACTGCTACCGGTTTGATGGGTAACCGGTTGAACAATGATCCACTGGTGGGTCTTCAGTCTTCTGCCAATTTGCCTTTGAGTGTTAATGGGGTGAGATCGTCCAGTCAGCAGCCACAGATGCAGAGTCCACAGTCTCAGCAACAGCATCAGCAGCAGATATTTCCTAAGCAGAGTCCTATGTCTTATGCAGCTGCTCAGATGCCCCAGGGAATGGTTAGAGGTGGGATTGTGGGACTCGGTGGTGATCAGGGTTTGAGCGTGCAAGGTGGAGGGATTGGTAGGGTTGGTTTGGCACCTGGGTCAGTTCATGTTACTACTGGGTCTCCTGCTGCTAACCAAATATCCGGTGATAAGATGACCAAGAGCAATGGTGATACCTCGTCTGTCTCACCGGTTCCTTATGTCTTTAACGGAGGCATGCGGGGGAGGAAGACTGGAGGAGCTGTGGAGAAGGTGATAGAGAGGAGGCAGAGAAGGATGATAAAGAACAGAGAGTCAGCTGCCAGGTCACGGGCACGCAAGCAGACTGTAGATTTTACTCTCAATATCAGAAAGGAGGGAGGAGTAGCTGTAACATTTTTCATGAAAATACGCCACATAATTTTCTATAATAGGGTTAGTGAATGTTCAGTTCTAAAATCGAAAGAATATAATGACGATATGCGTCATGTTATTTCTTTACTAATAGTAATACTGCTCGGCCATTGA 1251 0.5124 MNFKSFGNEAGGDGGGRPVGNFSLTRQPSVYSLTFDEFMNSMGGSGKDFGSMNMDELLKNIWTAEEVQTMASAGVATEDVGAGVSHLQRQGSLTLPRTLSQKTVDEVWKDISKDYGGHGGPNLAQTPRQPTLGEMTLEEFLVRAGVVREDAKPNDGVFMDLARAGNNNGLGFGFQQMNKVSTATGLMGNRLNNDPLVGLQSSANLPLSVNGVRSSSQQPQMQSPQSQQQHQQQIFPKQSPMSYAAAQMPQGMVRGGIVGLGGDQGLSVQGGGIGRVGLAPGSVHVTTGSPAANQISGDKMTKSNGDTSSVSPVPYVFNGGMRGRKTGGAVEKVIERRQRRMIKNRESAARSRARKQTVDFTLNIRKEGGVAVTFFMKIRHIIFYNRVSECSVLKSKEYNDDMRHVISLLIVILLGH 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2663g00018 416 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 24 357 IPR043452 GO:0003700|GO:0045893
Vium2663g00018 416 CDD bZIP_plant_BZIP46 336 356 - -
Vium2663g00018 416 MobiDBLite consensus disorder prediction 288 314 - -
Vium2663g00018 416 Gene3D - 334 361 - -
Vium2663g00018 416 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 339 354 IPR004827 GO:0003700|GO:0006355
Vium2663g00018 416 MobiDBLite consensus disorder prediction 288 318 - -
Vium2663g00018 416 SUPERFAMILY Leucine zipper domain 336 362 IPR046347 GO:0003700|GO:0006355
Vium2663g00018 416 MobiDBLite consensus disorder prediction 207 238 - -
Vium2663g00018 416 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2663g00018 Vium-Chr2663 161691 164086 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2663g00018 24 393 bZIP Transcription Factor Family AT1G45249 49.747 9.98e-88 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2663g00018 K14432 - gmx:100819313 543.117