Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2663g00014 ATGAATTTCAAGAGCTTCGGGAATGAAGCTGGTGGCGACGGAGGAGGGAGGCCGGTGGGGAACTTCTCCCTCACGCGGCAGCCGTCGGTGTACTCGCTGACGTTCGACGAGTTCATGAACAGCATGGGAGGTTCCGGGAAGGACTTTGGCTCCATGAACATGGACGAGTTGCTCAAGAACATTTGGACGGCGGAGGAGGTTCAGACAATGGCTTCGGCGGGCGTTGCCACCGAGGACGTAGGAGCCGGCGTCAGCCATTTGCAACGGCAGGGGTCGCTGACCCTGCCGCGGACTCTGAGCCAGAAGACAGTGGATGAGGTTTGGAAGGACATTTCGAAGGATTACGGTGGGCACGGAGGGCCCAATCTTGCACAGACGCCGAGACAGCCCACTCTGGGAGAGATGACTTTGGAGGAGTTTCTGGTCAGAGCTGGTGTTGTTAGAGAAGATGCGAAGCCAAACGACGGCGTTTTCATGGATCTGGCTCGTGCGGGGAATAACAACGGTTTGGGGTTTGGGTTCCAGCAGATGAACAAGGTTTCTACTGCTACCGGTTTGATGGGTAACCGGTTGAACAATGATCCACTGGTGGGTCTTCAGTCTTCTGCCAATTTGCCTTTGAGTGTTAATGGGGTGAGATCGTCCAGTCAGCAGCCACAGATGCAGAGTCCACAGTCTCAGCAACAGCATCAGCAGCAGATATTTCCTAAGCAGAGTCCTATGTCTTATGCAGCTGCTCAGATGCCCCAGGGAATGGTTAGGGGTGGGATTGTGGGACTCGGTGGTGATCAGGGTTTGAGCGTGCAAGGTGGAGGGATTGGTAGGGTTGGTTTGGCACCTGGGTCAGTTCATGTTGCTACTGGGTCTCCTGCTGCTAACCAAATATCCGGTGATAAGATGACCAAGAGCAATGGTGATACCTCGTCTGTCTCACCGGTTCCTTATGTCTTTAACGGAGGCATGCGGGGGAGGAAGACTGGAGGAGCTGTGGAGAAGGTGATAGAGAGGAGGCAGAGAAGGATGATAAAGAACAGAGAGTCAGCTGCCAGGTCACGGGCACGCAAGCAGGCTTATACCATGGAATTGGAAGCAGAAGTTGCAAAGTTAAAAGAAGAGAACCAAGAACTTGTGAAAAAACAGGCTGAAATCATGGAAATTCAGAAAAATCAAGTTAAGGAAATGATGAATTTGCAACGAGAAGTCAAGAGAAGACGCCTCAGACGAACACAAACTGGTCCGTGGTAG 1245 0.5253 MNFKSFGNEAGGDGGGRPVGNFSLTRQPSVYSLTFDEFMNSMGGSGKDFGSMNMDELLKNIWTAEEVQTMASAGVATEDVGAGVSHLQRQGSLTLPRTLSQKTVDEVWKDISKDYGGHGGPNLAQTPRQPTLGEMTLEEFLVRAGVVREDAKPNDGVFMDLARAGNNNGLGFGFQQMNKVSTATGLMGNRLNNDPLVGLQSSANLPLSVNGVRSSSQQPQMQSPQSQQQHQQQIFPKQSPMSYAAAQMPQGMVRGGIVGLGGDQGLSVQGGGIGRVGLAPGSVHVATGSPAANQISGDKMTKSNGDTSSVSPVPYVFNGGMRGRKTGGAVEKVIERRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEENQELVKKQAEIMEIQKNQVKEMMNLQREVKRRRLRRTQTGPW 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2663g00014 414 SUPERFAMILY Leucine zipper domain 336 383 IPR046347 GO:0003700|GO:0006355
Vium2663g00014 414 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 334 385 IPR004827 GO:0003700|GO:0006355
Vium2663g00014 414 MobiDBLite consensus disorder prediction 289 322 - -
Vium2663g00014 414 CDD bZIP_plant_BZIP46 336 390 - -
Vium2663g00014 414 Gene3D - 334 390 - -
Vium2663g00014 414 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 24 414 IPR043452 GO:0003700|GO:0045893
Vium2663g00014 414 SMART brlzneu 332 397 IPR004827 GO:0003700|GO:0006355
Vium2663g00014 414 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 339 354 IPR004827 GO:0003700|GO:0006355
Vium2663g00014 414 MobiDBLite consensus disorder prediction 207 238 - -
Vium2663g00014 414 MobiDBLite consensus disorder prediction 1 23 - -
Vium2663g00014 414 Coils Coil 352 404 - -
Vium2663g00014 414 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 5 334 391 - -
Vium2663g00014 414 MobiDBLite consensus disorder prediction 289 314 - -
Vium2663g00014 414 Pfam bZIP transcription factor 336 386 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2663g00014 Vium-Chr2663 155565 160034 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2663g00014 14 414 bZIP Transcription Factor Family AT1G49720 45.455 1.65e-90 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vium2663g00014 bZIP_1 9.9e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2663g00014 K14432 - gmx:100819313 632.484