Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vium2663g00008 | ATGGACACTGTGGAGCAGTTAAAGCTGGAGGAGGAGGAGGAGCAGCAGCAGCAGCAGATGGACATCACGACCATGATGATGCAACACCTCCCTCAATTCTCTGAACCCTATTGTGACACCGACACCATGGATGGTTTTCATCCCCAAGAAGACTTCTACAGTAACAACAACAATATACGCAGTGGTAGCACCATGCCACTGGCAGATTTACTAGATAATAACCCTCCCAGCCACTTACCTTGGTCCTCTTACTCATTCACGCACTTAATACCATCACCCACATCCTCCGCTATAATCTCTTTCTCCGTCAACAGCAACAACCCTACCCCAATAATGCTTCAACAAACCCCAACCGAGGGTGCAACTGCAACTGCAAACCCTTACGGTGAGAAGCGGAGCTCCATGGCGGCGATGAGGGAGATGATATTCAGGATGGCGGCGATGCAGCCGATACACATAGACCCGGAGTCGGTGAAGGCGCCGAAGAGGAGGAACGTGAAGATTTCGAAGGACCCTCAGAGTGTGGCAGCGCGGCACCGCAGAGAGAGGATCAGCGAGAGGATAAGGATCCTGCAGAGACTGGTCCCTGGAGGAACCAAGATGGACACCGCGTCGATGTTGGATGAGGCAATTCACTACGTCAAATTTCTGAAAACGCAGGTTGGGGGAGAGGGAGCAATGTGCAAGATGAATGCAGAAAGAAATGATGGTGGTGGTGCTTGGAACATCTGTACGGCCATAATGGGAGGGTTTCCGAGGCTTGGAAAAGTTGAAGACGACAAAGTGTTGACACGGTGTAAAAGAGGATGA | 810 | 0.5111 | MDTVEQLKLEEEEEQQQQQMDITTMMMQHLPQFSEPYCDTDTMDGFHPQEDFYSNNNNIRSGSTMPLADLLDNNPPSHLPWSSYSFTHLIPSPTSSAIISFSVNSNNPTPIMLQQTPTEGATATANPYGEKRSSMAAMREMIFRMAAMQPIHIDPESVKAPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVGGEGAMCKMNAERNDGGGAWNICTAIMGGFPRLGKVEDDKVLTRCKRG | 269 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vium2663g00008 | 269 | Gene3D | - | 164 | 224 | IPR036638 | GO:0046983 | |
Vium2663g00008 | 269 | PANTHER | TRANSCRIPTION FACTOR HEC3-RELATED | 18 | 221 | IPR045843 | GO:0003700|GO:0006355 | |
Vium2663g00008 | 269 | Pfam | Helix-loop-helix DNA-binding domain | 178 | 217 | IPR011598 | GO:0046983 | |
Vium2663g00008 | 269 | FunFam | BHLH transcription factor | 171 | 234 | - | - | |
Vium2663g00008 | 269 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 168 | 217 | IPR011598 | GO:0046983 | |
Vium2663g00008 | 269 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 172 | 222 | IPR036638 | GO:0046983 | |
Vium2663g00008 | 269 | SMART | finulus | 174 | 223 | IPR011598 | GO:0046983 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vium2663g00008 | Vium-Chr2663 | 122924 | 124957 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vium2663g00008 | 133 | 250 | Basic Helix-Loop-Helix Transcription Factor Gene Family | AT3G50330 | 75.424 | 1.35e-43 | 146 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bHLH | Vium2663g00008 | HLH | 1.8e-06 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vium2663g00008 | - | - | vum:124831293 | 400.208 |