Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2663g00004 ATGTGCAACAGTTCGACGAAGACGATGGATGGTCCTGTAGTGCATAAGGTTTCAGAATGCTTCGTCAAAGCGAACCACTCCACCCAAGAATCAAACCAAATATGTCACTTAACACCTTGGGATATTGCCATGTTGTCTGCACACTATATCCAAAAGGGTCTTCTCTACAAGAAGCCTGCAACCCTTGTTGATGAACGTGATTTCATAGAAAATCTGTTGGAAAAGCTCAAACACTCTCTTTCTCTCACCCTCTCCCATTTCTATCCATTGTGTGGTCGCCTTGTCACCCACAAAACCAAAAACCCTCCCTTCTATACTGTTTTCGTCGATTGCACAAGTAATTCGGGAGCTAGATTCATCCATGCAACTTTAGATATGACAATATCTGATATCCTCTCTCCCGTTGATGTCCCACCCATTGTTCAATCATTGTTTGATCACGATAGAGCACTCAACCACGATGGTCACACCATGCCGCTGTTGTCCATCCAAGTAACCGAGCTAGTGGATGGTGTTTTCATAGGCTGTTCCATGAACCACTCTCTCGGTGATGGCACTGCTTATTGGAATTTCTTCAACGCGTGGTCAGAGATCTTTCGAGCTCAAGCTCAAGGCCATGAACATGATGCTCCCATATCGCACCCTCCCATTCACAACCGCTGGTTTCCGAATGATTGCGTTCCACCAATCGATCTTCCTTTCAAACACCACAACGAGTTTATCAGTAGGTATGAAGCACCCATGATGAGAGAGAGAATATTCCACTTTTCAGCAGAGTCTATTGCAAAACTGAAAGCAAAAGCCAACTCGGAATGCAATACCACAAAAATATCTTCGTTTCAATCACTGTCAGCACTTGTTTGGAGATGCATAACTCGGGCGCGGAGCTTGGCGCGTGATCAGAAAACAAGTTGCAAGTTATCGACAAACAACCGTACAAGAATGGATCCGCCACTGGCTAAGGAGTACTTTGGAAACTCGATTCATACACTGAATGCAGGAACAGCCACCTCAGGGGAATTGCTTGAGAATGGTCTGGGATGGGCAGCGTGGAAGTTGCACATGGCTGTTATAAACCATAATGACAGGGTGGTGTTGGGATGGGTGAGAGAGTGGTTAAAGTGTCCTCTGATATATCAACTTGGTCGTTATTTTGATCCCTACTGTGTGATGATGGGAAGCTCACCCAGATTCAACATGTACGGGAATGAATTTGGAATGGGGAAAACAGTAGCAGTTAGAAGTGGATATGCCAACAAATTTGATGGAAAAGTTACGTCATATCCAGGTCATGAAGGAGGAGGAAGCGTGGATTTAGAAGTATGTCTTTCTCCAAGTGTTATGACTGCGCTGGAATCCGACCAGGAGTTCATGGATTCAGTTTCAGCTTCCAATCCTCTCTAG 1404 0.4494 MCNSSTKTMDGPVVHKVSECFVKANHSTQESNQICHLTPWDIAMLSAHYIQKGLLYKKPATLVDERDFIENLLEKLKHSLSLTLSHFYPLCGRLVTHKTKNPPFYTVFVDCTSNSGARFIHATLDMTISDILSPVDVPPIVQSLFDHDRALNHDGHTMPLLSIQVTELVDGVFIGCSMNHSLGDGTAYWNFFNAWSEIFRAQAQGHEHDAPISHPPIHNRWFPNDCVPPIDLPFKHHNEFISRYEAPMMRERIFHFSAESIAKLKAKANSECNTTKISSFQSLSALVWRCITRARSLARDQKTSCKLSTNNRTRMDPPLAKEYFGNSIHTLNAGTATSGELLENGLGWAAWKLHMAVINHNDRVVLGWVREWLKCPLIYQLGRYFDPYCVMMGSSPRFNMYGNEFGMGKTVAVRSGYANKFDGKVTSYPGHEGGGSVDLEVCLSPSVMTALESDQEFMDSVSASNPL 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2663g00004 467 Gene3D - 237 454 IPR023213 -
Vium2663g00004 467 Pfam Transferase family 18 458 - -
Vium2663g00004 467 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 17 458 - -
Vium2663g00004 467 FunFam Tryptamine hydroxycinnamoyl transferase 235 455 - -
Vium2663g00004 467 Gene3D - 16 228 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2663g00004 Vium-Chr2663 40713 42239 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2663g00004 74 452 Monolignol Biosynthesis Gene Families AT5G48930 27.250 7.17e-31 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2663g00004 - - gmx:100787228 778.859