Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2663g00002 ATGGCTACCCATGGCTTTCGTCGCATTTCCGAATGCTTCGTCCAGCCACACCGCCCCACTCAAATGTCAAACCAAATATGTCATTTAACACCTTGGGATATTGCAATGTTGAGTAGCCACTATATCCAGAAGGGTCTACTTTTCAAGAAGCCTTCAACACTTGTTCATCCAGATCATTTCACAGACAAACTGCTGGAGAAACTCAGACACTCTCTTTCTCTCACCCTCTCCCATTTCTATCCATTAGCGGGCCGTTTCGTCACCCACAAAACGCAAGACCCTCCCTCTTATGCTGTTTTCATTGATTGCAAAAACAGTGACGGAGCTAAATTCATCTATGCAACCTTGGACATGACCATATCTGACATACTCTCTCCCATTGACGTCCCACCCATTGTCCACTCATTCTTTGACCACCACAAAGCAGTCAACCATGACGGTCACACCATGCCATTGTTGTCCATCCAAGTCACTGAACTAGTGGATGGTGTTTTCATAGGTTGTTCCATGAACCATGCTGTTGGTGATGGCACTTCTTACTGGAATTTCTTCAAGACATGGTCTCAGATCTTTCAAGCTCATGATCAAGGACATGAATACGAGGTTTCCATTTCACAGCAACTCATTCACAATAGATGGTTTCCGAATGATTGCAGCCCACCAATCAATCTTCCTTTCAAACATCACGACGAGTTTATCAGCAGATTTGAAGCGCCCTTTCTGAGAGAGAGAGTCTTCCACTTTTCGGCGGACTCTATTGCGAAACTGAAAGCAAAAGCCAACTCAGAGTGCAATACCACAAAAATCTCTTCATTCCAGTCATTATCAGCACTTGTTTGGAGAAGCATAACTCGAGCCCGCTCCCCACCGTACGAGCAAAGAACAAGTTGCAAGTTGGCCATAAACAATCGACCAAGAATGGGAGCGGTGCCTGAGGAATACTTTGGAAACTCAATTCATGTGGTGAGTGCAGAAACAACGACAGGGGAATTGGTTGAGAATGGTCTAGGATGGGCAGCGTGGAAGTTGAACTTGACTGTTGCAAAGCATAATGAGAGAGTGGTACTGGAATTGCTGAGAAAGTGGTTAGAATGTCCATTGATATATGACCTTGGTAGTTTCTATGGCCCGTACTGTGTGATGATGGGTAGCTCGCCCAGGTTTAGCGTGTATGGAAATGAATTTGGAATGGGAAAAGCAGTGGCCGCTAGAAGTGGGTATGCTAACAAGTATGATGGGAAAGTGACATCATATCCAGGTCGTGAAGGAGGGGGAAGCATTGATTTGGAAGTTTGCCTTTCCCCAGATAATATGAGAGCGCTCGAATCGGATCAAGAGTTCATCAATGCAACTTCTCACTCCAGTCTCTTGTACTACAACAGCAGAGGAGCTAGATTCATCCATGCAACTTTGGATATGACAATATCTGACATCCTCCCCCCCGTTGATGTCCCTCCTATTGTGCACTCATTCTTTGACCTCCACAAAGCAGTCAACCATGATGGTCATACCATGCCACTCTTGTCGATTAAAGTTACTGAACTAGTGGACGGTGTTTTCATAGGTTGTTCCATGAACCACAATATCGCTGATGGCACTTCTTATTGGAATTTCTTCAATGCATGGTCTGAGATCTTTCAAGCTCAAGCTGAAGGGAATGAACACGATGTTCCGATTTCATGTCATCCTATTCATAACCGGTGGTTTCCAGATGGTTGCGGCCCATTAATCAACCTTCCCTTCAAACATCACGACGAGTTTATTAGCAGATTTGAAGCACCCCAGCTGAGGGAGAGAATCTTCCATTTTTCAGCAGAGTCTATTGCAAAACTGAAAGCAAGGGCGAATTCAGAGTCCAAAACCACACAAATCTCTTCGCTCCAATCCTTATCAGCTCATGTTTGGAGATGCGTAACACGGGCACGCCAGATGGCACACGGTGAGAGAACAAGTTGCAAATTGGCCATAAATAACCGGTCAAGAATGGAACCGCCTCTGCCGGCCGAGTACTTTGGAAGTGCTGTTGGTGTGGTGAGCGCAGAGAGCACGGTAGGGGAATTGCTGGAGAATGATCTAGGATGGGCTGCACGGAAGGTGCTCGTGGCTGTTGACAACCATAACGACAGAGTGGTGAGAGACATGGTGAAAGAGTGGTTGCAGCATCCAGTGATTTACCAACTTGGTGTGATCGTTGACTCCAGTTGCGTGATGATATCAAGTTCTCCCAGGTTCAATGTGTATGGAAATGAATTCGGAATGGGAAAAGCGGTGGCAGTTCTGAGTGGGTATGCCAACAAATTTGACGGAAACGTGATCGCACATCCAGGACGTGAAGGAGGAGGAAGCATAGATTTTGAACTCTCCCTTTCACCTCATGTAATGTGTGCACTGGAATCAAATCACGAGTTCATGGAAGCTGTTTCCGTGCCCAATATTCTGCACTACCCAACATCCACCGATTCAGTTCAGACATCTCTAAGATATCTGCGAAACAACTCCGAAATTTTGGTGAGAGTTTGGATGATGAATTCCACAGTCGTAATAAACGTTTCAGAATGTTTTATCATGCCGTTTGGCCCAGCTCAAGAGTCCAATCGAATATGCAATTTAACACCTTGGGATATTGGTATGCTGTCTATGCATTACATCCAGAAGGGTCTACTCTTCAAGAAACCTGCAACACTTGTTGATCGACAAGATTTCATAGAGAATCTGTTGGAGAAGCTCAAGCACTCTCTTTCTCTCACCCTCTTCCATTTTTATCCATTGGCAGGCCACCTTGTCACAAACAAAGACCCTTCCTCTTATACTATTTTCGTTGATTGCAACAACAGTCATGGAGCTAGATTCATCTATGCAACTTCGGATTTGACAATATTTAACATACTCTCCCCTGTTGACGTCCCAGCCGTTGTTCACTCATTCTTTGATCATCACAAAGCTGTCAACCATGATGGTCACACGATGCCTCTGTTTTCCGTTAAAGTCACTGAACTATTGGATGGTGTTTTCATAGGCTGTTCTATGAACCACGCCATAGGCGATGGAACATCTTATTGGAATTTCTTTAATACATGGTCTGAGATCTTTCAAGCTCATGCTCAAGGTCATGAATACGATGTTCCCATTTCACGCCACCCCATTCATAACCGGTGGTTTCCTGATGGTTGTGATCCATTAATCAATCTTCCCTTTAAACATCACGACCAGTTTATTAGCAGATTTGAAGCACCCCAGCTGAGAGAGAGAATCTTCCATTTTTCAGCAGAGTCATTTGCAAAACTGAAAGCAAGGGCTAACTCAGAGTCCAAGACCCCCAAAATCTCTTCGTTCCAATCCTTATCAGCTCATGTATGGAGATGCATAACACGTGCTCGTCAGCTGCCACATGATGAGGTAACTAGCTGCAAATTGGCCATGAATAATCGAGCAAGAATGGAGCCGCCTCTGCCACATGAATACTTTGGAAACTGTATTAGTGTGGTGAGTGCGGGGACAACAGTAGGGGAATTGCTGGAGAATGATCTAGGATGGGCTGCATGGAAGGTGCGCCTGGCCGTTGCAAACCAAAACGACGGAGCAGTGCGACACGCGGTGAAAGAGTGGTTACAACGCCCTGTGGTGTACCAACTTGGTGTGCACTTTGATTCGCGTAGTGTGACGATGTCAAGTTCGCCCAGGTTTGACATGTATGGGAATGAATTTGGGATGGGAAAAGCTGTTGCAGTTCTGAGCGGATATGCCAACAAATTTGATGGGAATGTGACTTCATATCCAGGATCTGAAGGAGGGGGAAGCATAGATTTGGAAGTGTCCCTTTCGCCCGATGCAATGAGCTTACTAGAATCGGATGAGGAGTTTATGGAAGTTGTTTCAGTGGCCAATTCCCTACTCTGGCGACTTTGTTGA 3909 0.4536 MATHGFRRISECFVQPHRPTQMSNQICHLTPWDIAMLSSHYIQKGLLFKKPSTLVHPDHFTDKLLEKLRHSLSLTLSHFYPLAGRFVTHKTQDPPSYAVFIDCKNSDGAKFIYATLDMTISDILSPIDVPPIVHSFFDHHKAVNHDGHTMPLLSIQVTELVDGVFIGCSMNHAVGDGTSYWNFFKTWSQIFQAHDQGHEYEVSISQQLIHNRWFPNDCSPPINLPFKHHDEFISRFEAPFLRERVFHFSADSIAKLKAKANSECNTTKISSFQSLSALVWRSITRARSPPYEQRTSCKLAINNRPRMGAVPEEYFGNSIHVVSAETTTGELVENGLGWAAWKLNLTVAKHNERVVLELLRKWLECPLIYDLGSFYGPYCVMMGSSPRFSVYGNEFGMGKAVAARSGYANKYDGKVTSYPGREGGGSIDLEVCLSPDNMRALESDQEFINATSHSSLLYYNSRGARFIHATLDMTISDILPPVDVPPIVHSFFDLHKAVNHDGHTMPLLSIKVTELVDGVFIGCSMNHNIADGTSYWNFFNAWSEIFQAQAEGNEHDVPISCHPIHNRWFPDGCGPLINLPFKHHDEFISRFEAPQLRERIFHFSAESIAKLKARANSESKTTQISSLQSLSAHVWRCVTRARQMAHGERTSCKLAINNRSRMEPPLPAEYFGSAVGVVSAESTVGELLENDLGWAARKVLVAVDNHNDRVVRDMVKEWLQHPVIYQLGVIVDSSCVMISSSPRFNVYGNEFGMGKAVAVLSGYANKFDGNVIAHPGREGGGSIDFELSLSPHVMCALESNHEFMEAVSVPNILHYPTSTDSVQTSLRYLRNNSEILVRVWMMNSTVVINVSECFIMPFGPAQESNRICNLTPWDIGMLSMHYIQKGLLFKKPATLVDRQDFIENLLEKLKHSLSLTLFHFYPLAGHLVTNKDPSSYTIFVDCNNSHGARFIYATSDLTIFNILSPVDVPAVVHSFFDHHKAVNHDGHTMPLFSVKVTELLDGVFIGCSMNHAIGDGTSYWNFFNTWSEIFQAHAQGHEYDVPISRHPIHNRWFPDGCDPLINLPFKHHDQFISRFEAPQLRERIFHFSAESFAKLKARANSESKTPKISSFQSLSAHVWRCITRARQLPHDEVTSCKLAMNNRARMEPPLPHEYFGNCISVVSAGTTVGELLENDLGWAAWKVRLAVANQNDGAVRHAVKEWLQRPVVYQLGVHFDSRSVTMSSSPRFDMYGNEFGMGKAVAVLSGYANKFDGNVTSYPGSEGGGSIDLEVSLSPDAMSLLESDEEFMEVVSVANSLLWRLC 1302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2663g00002 1302 FunFam Tryptamine hydroxycinnamoyl transferase 583 801 - -
Vium2663g00002 1302 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 850 1289 - -
Vium2663g00002 1302 FunFam Tryptamine hydroxycinnamoyl transferase 1066 1284 - -
Vium2663g00002 1302 Pfam Transferase family 460 804 - -
Vium2663g00002 1302 Pfam Transferase family 12 447 - -
Vium2663g00002 1302 Pfam Transferase family 860 1288 - -
Vium2663g00002 1302 Gene3D - 586 800 IPR023213 -
Vium2663g00002 1302 Gene3D - 1068 1283 IPR023213 -
Vium2663g00002 1302 Gene3D - 234 444 IPR023213 -
Vium2663g00002 1302 Gene3D - 445 575 IPR023213 -
Vium2663g00002 1302 Gene3D - 9 220 IPR023213 -
Vium2663g00002 1302 Gene3D - 849 1064 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2663g00002 Vium-Chr2663 11815 19233 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2663g00002 483 798 Monolignol Biosynthesis Gene Families AT5G48930 25.797 9.28e-24 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2663g00002 - - vum:124831304 2681.36