Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2654g00010 ATGAAGACGCAAATTCTCAAGTCTCTGCAAACCATTATTCTTCTGCTGCTGCTGACAGCGTTCTTTAGCAGCACCAACACCAAAGCAGAAGAAAAGCAAACACACCGCCAAACCAAAAAGACCTACATAATCCACATGGACAAGTCCACCATGCCCGCGACTTTCTCCGACCACCTCAACTGGTTCGACTCCTCCCTCAAATCAGCATCAGCCACCGCAGAGATCCTCTACACCTACAAACACGTGGTTCACGGCTTCTCCACCAGGCTCACACCCCAAGAAGCAGAAACACTCGCGAACCAACCAGGAATTCTCTCAGTGACCCCAGAACTTCGATACAAGCTCCACACCACAAGAACACCGCAGTTCCTCGGACTCGACAAAAGCACCACGCTCTTACCCGCGTCCCAGCAACAGAGCCAGGTCATCATCGGAGTCCTTGACACCGGCGTCTGGCCCGAGCTGAAGAGCCTCGATGACACGGGCCTGGGCCCGGTACCCGCCACGTGGAAAGGCGAGTGCGAAGTTGGCAGCAACATGAACTCCTCACACTGCAACAGAAAACTAGTGGGTGCGAGGTTTTTCTCCAAAGGCTACGAATCCGCTCTTGGACCTGTTGACCTAAGTACAGAGTCAAAGTCAGCGAGAGACGACGAGGGGCATGGGAGTCACACGCTCACCACGGCAGCAGGCTCGGTGGTTCCCGAAGCTAGCTTCTTCGGTTTGGCGTCAGGCACGGCTCGTGGAATGGCGCCGCAAGCGCGCGTGGCGGTTTACAAAGTGTGCTGGCTTGGTGGGTGTTTTTCTTCCGACATAGCCGCGGGGATCGACAAGGCCATAGAAGACGGCGTGAACGTTTTATCCATGTCGATTGGGGGAAGCTTATTGGAGTATTACAGAGACATTATCGCGATTGGTACCTTCTCTGCCACGTCACACGGGATTTTAGTTTCCATGTCAGCAGGGAACGGTGGGCCCAGTTCGTCAACTCTATCCAACGTGGCGCCGTGGATAACCACGGTGGGAGCGGGAACTTTAGACCGCGATTTCCCTGCTTACATAACGCTCGGAAACGGAAAAACATACACCGGAGCCTCGCTTTATAGCGGTAAACCCTTGCCGGATTCTCCGCTTCCTCTCGTTTACGCTGGCAACGCGAGTAACTCTTCTGTTGGGTATCTTTGCTTGCAAGATTCTCTCATTCCTGAGAAGGTTTCAGGGAAGATTGTGATATGCGAGAGAGGGGGAAATCCCAGAGTGGAAAAGGGTTTGGTGGTGAAGCTAGCGGGAGGTGCTGGAATGATTTTGGCCAACAATGAAGCTTACGGGGAAGAGTTAGTTGCTGACCCTCATCTTCTTCCTGCTGCATCGCTGGGCCAAAAATCAAGTCAAATTCTTAAGAGTTACGTTTCTTCTTCCGTAAATCCCACCGCTAAGATTGCTTTCGTAGGAACCCATTTGGAGGTTCAACCTTCCCCGGTTGTGGCGGCTTTCAGCTCCAGAGGACCCAACGCTCTCACGCCCAAGATTCTCAAACCGGATTTAATAGCTCCAGGGGTCAACATTTTAGCCGGTTGGACCGGCGCGGTTGGACCGACCGGGTTGACCGCTGACGATCGCCATGTCAGCTTCAACATAATTTCCGGAACCTCCATGTCTTGCCCTCACGTCAGTGGCTTGGCCGCGATTGTCAAAGGCGCGCACCCTCAATGGAGCCCTGCGGCTATTAGATCCGCACTCATGACAACAGCCTACACGAGTTACAAAAACGGCGCCGCAATTGAAGATGTTGCGACTGGGCAACCTGCAACGCCGTTCGATTATGGCGCGGGACACGTGAATCCCGTGGCTGCCCTTGATCCTGGTCTGGTGTATGATGCCGACGTGGAAGACTACTTGGGATTCTTCTGCGCGCTAAACTACACATCGTTTCAAATCAAGCTTGCTGCGAGGAGGGACTTTACTTGTGACCCGAAGAGGGAATACAGAGTGGAGGATTTCAACTATCCTTCGTTTGCAGTTGCTTTGGAGACAGCTTCGGGGATTGGGGGTGGTTCGGATGCTCCCCATACTGTGAAGTACTCTAGGGTTTTGACTAACGTCGGAGCTCCGGGAACGTATAAAGCTTCGGTGGTGCCGTTGGGGGATTCGAATGTGAAGATTGTGGTGGAACCGGGGACGCTGAGTTTCGCGCAGGAGTACGAGAAGAAGAGCTATACGGTGTCGTTTACATACACCTCCAAGCCCTCCGGGACCAGTAGCTTTGCGCGTTTGGAATGGACGGATGGAAAACATAGGGTTGCAAGCCCAATTGCGTTCAGCTGGACATGA 2331 0.5328 MKTQILKSLQTIILLLLLTAFFSSTNTKAEEKQTHRQTKKTYIIHMDKSTMPATFSDHLNWFDSSLKSASATAEILYTYKHVVHGFSTRLTPQEAETLANQPGILSVTPELRYKLHTTRTPQFLGLDKSTTLLPASQQQSQVIIGVLDTGVWPELKSLDDTGLGPVPATWKGECEVGSNMNSSHCNRKLVGARFFSKGYESALGPVDLSTESKSARDDEGHGSHTLTTAAGSVVPEASFFGLASGTARGMAPQARVAVYKVCWLGGCFSSDIAAGIDKAIEDGVNVLSMSIGGSLLEYYRDIIAIGTFSATSHGILVSMSAGNGGPSSSTLSNVAPWITTVGAGTLDRDFPAYITLGNGKTYTGASLYSGKPLPDSPLPLVYAGNASNSSVGYLCLQDSLIPEKVSGKIVICERGGNPRVEKGLVVKLAGGAGMILANNEAYGEELVADPHLLPAASLGQKSSQILKSYVSSSVNPTAKIAFVGTHLEVQPSPVVAAFSSRGPNALTPKILKPDLIAPGVNILAGWTGAVGPTGLTADDRHVSFNIISGTSMSCPHVSGLAAIVKGAHPQWSPAAIRSALMTTAYTSYKNGAAIEDVATGQPATPFDYGAGHVNPVAALDPGLVYDADVEDYLGFFCALNYTSFQIKLAARRDFTCDPKREYRVEDFNYPSFAVALETASGIGGGSDAPHTVKYSRVLTNVGAPGTYKASVVPLGDSNVKIVVEPGTLSFAQEYEKKSYTVSFTYTSKPSGTSSFARLEWTDGKHRVASPIAFSWT 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2654g00010 776 Gene3D - 347 487 - -
Vium2654g00010 776 ProSiteProfiles Serine proteases, subtilase domain profile. 112 619 - -
Vium2654g00010 776 Pfam PA domain 379 463 IPR003137 -
Vium2654g00010 776 CDD Peptidases_S8_3 113 585 IPR034197 -
Vium2654g00010 776 Gene3D - 636 775 - -
Vium2654g00010 776 FunFam Subtilisin-like protease SBT1.9 30 116 - -
Vium2654g00010 776 FunFam subtilisin-like protease SBT1.5 347 487 - -
Vium2654g00010 776 Pfam Peptidase inhibitor I9 41 116 IPR010259 -
Vium2654g00010 776 SUPERFAMILY Subtilisin-like 115 623 IPR036852 GO:0004252|GO:0006508
Vium2654g00010 776 ProSitePatterns Serine proteases, subtilase family, serine active site. 549 559 IPR023828 -
Vium2654g00010 776 Gene3D Peptidase S8/S53 domain 142 632 IPR036852 GO:0004252|GO:0006508
Vium2654g00010 776 SUPERFAMILY PA domain 374 442 IPR046450 -
Vium2654g00010 776 PRINTS Subtilisin serine protease family (S8) signature 217 230 IPR015500 -
Vium2654g00010 776 PRINTS Subtilisin serine protease family (S8) signature 139 158 IPR015500 -
Vium2654g00010 776 PRINTS Subtilisin serine protease family (S8) signature 548 564 IPR015500 -
Vium2654g00010 776 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 42 772 IPR045051 -
Vium2654g00010 776 Pfam Subtilase family 140 611 IPR000209 GO:0006508|GO:0008236
Vium2654g00010 776 FunFam Subtilisin-like protease SBT1.5 141 357 - -
Vium2654g00010 776 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 116 IPR037045 -
Vium2654g00010 776 CDD PA_subtilisin_like 353 480 - -
Vium2654g00010 776 Pfam Fibronectin type-III domain 666 772 IPR041469 -
Vium2654g00010 776 SUPERFAMILY Protease propeptides/inhibitors 40 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2654g00010 Vium-Chr2654 71099 73734 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2654g00010 1 776 Subtilisin-like Serine Gene Family AT5G67360 62.853 0.0 1004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2654g00010 - - gmx:100793808 1362.44