Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2653g00004 ATGAAATATCTTGGACAGTTGCCTCAAGTTTATGAACATGTCTTGAAAGAACAACTTGAAATTATTCGAGGGAAAGAGGTAGGGCAGTTGTTGCAGTGGGAAGATATTCAGAAAATGAAATACTCTTGGAATGTTGTATGTGAAGTCATGAGGTTGTCTCCACCAGTCAGTGGTGCTTATAGAGAAGCTATAAAGGATTTCACCTATGCTGATTATAACATCCCTAAAGGCTGGAAGTTGCATTGGAACACTAATTCATCACACAAGGATCCAACAATCTTCTCGGATCCAGAAACTTTTGATGCTTCAAGGTTTGAAGGAGCAGGGCCTACACCTTTTGCACATGTTCCATTTGGAGGTGGCCCCAGAATGTGTTTGGGCCAAGAATTTGCTAGACTAGAGATACTTGTGTTCATGCATAATATCGTGAAACGGTTCAAGTGGGAATTGGTGATTCCTGATGAAAAGTTGAAGTATGATCCCATGCTAGAACCAGTAAAGGGACTTGAAATTCGACTTCATCCTTCTAGTTCATAG 537 0.406 MKYLGQLPQVYEHVLKEQLEIIRGKEVGQLLQWEDIQKMKYSWNVVCEVMRLSPPVSGAYREAIKDFTYADYNIPKGWKLHWNTNSSHKDPTIFSDPETFDASRFEGAGPTPFAHVPFGGGPRMCLGQEFARLEILVFMHNIVKRFKWELVIPDEKLKYDPMLEPVKGLEIRLHPSSS 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2653g00004 178 Gene3D Cytochrome P450 1 176 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2653g00004 178 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 118 127 IPR017972 GO:0005506|GO:0016705
Vium2653g00004 178 PANTHER CYTOCHROME P450 26 1 161 - -
Vium2653g00004 178 SUPERFAMILY Cytochrome P450 1 175 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2653g00004 178 Pfam Cytochrome P450 4 154 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2653g00004 178 PRINTS B-class P450 signature 61 88 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2653g00004 178 PRINTS B-class P450 signature 125 136 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2653g00004 178 PRINTS B-class P450 signature 44 55 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2653g00004 178 PRINTS B-class P450 signature 89 104 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2653g00004 178 PRINTS B-class P450 signature 116 125 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2653g00004 178 PRINTS P450 superfamily signature 44 55 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2653g00004 178 PRINTS P450 superfamily signature 116 125 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2653g00004 178 PRINTS P450 superfamily signature 125 136 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2653g00004 Vium-Chr2653 7084 8494 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2653g00004 1 147 Cytochrome P450 AT5G45340 42.177 9.86e-34 122