Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2608g00001 ATGGGATCCTTTGGCAAACCCCTTTTGTTTCTCCTTTTTGTCATGGCTACCTGTGATCCTGCTACATCCACAAACTCAAACTCTACCACACAGACATTATTATTAGGAGAACGGAACGGCTCTGTCGATTATTTGTTATTGCACACCGTACATGTGCGTATAGTCAACAAGCTTGGTCACAACTTACCTCTCAGTGTTCATTGCAAATCCAGAGATGACGATCTTCAGGTTCATGTCATTAACTATGATAAAAGTTTTGGGTTTCACTTCCGTCCTAATTTTTGGGGCACAACGTTGTTCTTCTGTCACTTTTCATGGAGTGGGGGACAAGGGACCTATGATATCTATAAGGATAGGAGGGATAATGATAGGTGCACATTTCACTGTGATTGGTATGCCACCAAAGAAGGTTTAGAAGGCTATACAGAAGAGAGTTCGTTTTTAGGCAGGCCACACAAGCGAGACATATTGTTCCAGTGGGAAAATCCATGA 492 0.4228 MGSFGKPLLFLLFVMATCDPATSTNSNSTTQTLLLGERNGSVDYLLLHTVHVRIVNKLGHNLPLSVHCKSRDDDLQVHVINYDKSFGFHFRPNFWGTTLFFCHFSWSGGQGTYDIYKDRRDNDRCTFHCDWYATKEGLEGYTEESSFLGRPHKRDILFQWENP 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2608g00001 163 PANTHER - 48 138 IPR010264 -
Vium2608g00001 163 Pfam Plant self-incompatibility protein S1 51 139 IPR010264 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2608g00001 52 137 Carbohydrate Esterase AT3G16970 42.697 4.57e-17 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2608g00001 - - var:108339240 342.813