Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2585g00001 ATGCCGAGAAAAGGAATGAGAAGCATTTTCTTCAGGCCATCGTCTTCTCCTTCATCTTCCACCTCATCACAACCACCTCCCTCCCCTCTCCGCACATTTTCAGACTCCTTAATGGAACAGAACATACAAATCGCAGAGGCTCTCGTAACCAAATGGGACGATTCCAAACTCGGAACGCCGCTTTTCAGCGGCACGCGCCAGGAAGCCAGAAGGTACCTTGACGCTGTAAAGGGACTACAATCCGCTATGCAGTACTTCGTCGCACAGGATTCCACCTCCGCCACTCTTGTGCGCGCTCAGTTCCTCATGCAACTCGCCATGAAGACGCTTCAGAGAGAGTTCTACCAGATTCTTTCCTCCAACAGAGACCACCTGGATCCTGAAACTGTCTCCGCGCGCTCCTCCATTGATCTCCGCAGCAGCGTCTCTGAGTACGTTTCCGATTACGACGACGAAATCACAGCCTCCGAGGATGACTTCCGCATCTCCGAGACCGAGCGTGTGTCAATGCTCGCCATGGAGGATTTGAAAGCCATTGCGGATTGCATGATTTCCTCGGGCTACGGGAAAGAGTGCGTCCAAGTTTACATCCTCATGAGAAAATCTATTGTCGACGAAGCGCTGTACCATCTCGGAGTGGAAAAATTGAGCCTCGCTCGGGTTCAGAAACTGGACTGGGAGGTTCTCGAGTTGAAGATCAAGAAATGGTTGAACGCTGTTAAAGTCGCCGTTGGAACTCTCTTCCACGGCGAGAGAATCCTCGCTGACCACGTCTTCTCCTCGAATCCCGAAAAGAGGATCTCCGAATCCTGTTTCGCTGAAATCACCAAAGACGGCGCCTTTTCCCTGTTCGGATTCCCCGAAATGGTGGCGAAGTGCAAGAAATCACCGGAAAAAATGTTCAGGACGTTGGATTTGTACGAAGCGATCTCTGACCGGTGGACTCGGATCGAATCCTTATTCTCTTTCGAATCCACGTCTGCCATTCGCTTACAGGCCATTACGTCCATGGTGAAACTCGGGGAAGCCGTTAGAACGATGCTAACGGACTTCGAAACCGCGATTCAGAAGGACTCCTCCAAGACAACGGTCCCTGGTGGTGGGGTCCACCCTCTCACGCGCTACGTGATGAACTACCTAACTTTCCTCGCCGATTACAGCGGGGTGTTGGTTGATATAATCCCTGATTTGCCGCAATCGCCGTTGCCGGAGTCTTACTACCGTAGCCCGATGCGTGACGAAAACCCGCCGGCGTCGGAGTTATCCGAGAAAATCGCGTGGCTCATTCTCGTTGTGCTGTGCAAGCTCGACGGCAAAGCGGAATTCTACAAGAACGTAGAGCTTTCATACCTGTTTCTGGCTAACAACATGCAATACGTCGTGAGTAAGGTGCGCAGATCGAACCTAGGGTTCCTTCTCGGAGAGGAGTGGTTGGCGAAGCACGAGTTAAAGGTTACTGAGTACGCGTCCAAGTACGAGCGCGTCGGGTGGAGCAAGGTGTTCGCGTCGTTACCGGAAAATCCAGCGGCGGAGGTGAAGGCGGAGCAGGCAAGGACCCATTTCATGAAGTTCGACGCTGCGTTTCATGAAACGTGCAGAAAACAGTCGTCGTGGGTGGTATCCGACCCGAAATTGAGAGACGAAATCAAAGGCTCGATAGGTTCGAAGCTGATGCAAAAGTACAGCGAATTTTACGAGAAGAATCGGGTCGGGTCAAAGTCCTTTCGGTTTATTTTGCCCGAAGATATTGAGAAAAACTTGTCCAACATTTTGTGCGGGAATGGAGATTCGGGCAGTGTCTCCTCACATTCTTCATCAACGACGTCGTCTTCCCATCGCTCTAATCGGCGGTGA 1854 0.5178 MPRKGMRSIFFRPSSSPSSSTSSQPPPSPLRTFSDSLMEQNIQIAEALVTKWDDSKLGTPLFSGTRQEARRYLDAVKGLQSAMQYFVAQDSTSATLVRAQFLMQLAMKTLQREFYQILSSNRDHLDPETVSARSSIDLRSSVSEYVSDYDDEITASEDDFRISETERVSMLAMEDLKAIADCMISSGYGKECVQVYILMRKSIVDEALYHLGVEKLSLARVQKLDWEVLELKIKKWLNAVKVAVGTLFHGERILADHVFSSNPEKRISESCFAEITKDGAFSLFGFPEMVAKCKKSPEKMFRTLDLYEAISDRWTRIESLFSFESTSAIRLQAITSMVKLGEAVRTMLTDFETAIQKDSSKTTVPGGGVHPLTRYVMNYLTFLADYSGVLVDIIPDLPQSPLPESYYRSPMRDENPPASELSEKIAWLILVVLCKLDGKAEFYKNVELSYLFLANNMQYVVSKVRRSNLGFLLGEEWLAKHELKVTEYASKYERVGWSKVFASLPENPAAEVKAEQARTHFMKFDAAFHETCRKQSSWVVSDPKLRDEIKGSIGSKLMQKYSEFYEKNRVGSKSFRFILPEDIEKNLSNILCGNGDSGSVSSHSSSTTSSSHRSNRR 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2585g00001 617 MobiDBLite consensus disorder prediction 596 617 - -
Vium2585g00001 617 MobiDBLite consensus disorder prediction 11 30 - -
Vium2585g00001 617 SUPERFAMILY Cullin repeat-like 60 589 IPR016159 -
Vium2585g00001 617 Gene3D Exocyst complex component Exo70 54 598 - -
Vium2585g00001 617 PANTHER EXOCYST COMPLEX PROTEIN EXO70 32 587 IPR004140 GO:0000145|GO:0006887
Vium2585g00001 617 MobiDBLite consensus disorder prediction 1 30 - -
Vium2585g00001 617 Pfam Exo70 exocyst complex subunit 234 587 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2585g00001 Vium-Chr2585 3084 5084 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2585g00001 22 594 EXO70 exocyst subunit family AT5G59730 48.344 1.86e-180 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2585g00001 K07195 - gmx:100810579 944.11