Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium256g00002 ATGGAAAAGCTGGACCTAAAGCTAAGAAGCTGCCAAGCAAAAACCATTGGGACTGTGGTCTCAATTGCAGGGGCATTAACAATGACTTTGTACAAAGGTTTTGCTGTGACAAGTAATCTCATGCAAAACAATTTAGTGCTCTCATCTCAACAATCACAATGGCTACTAGGAGCATTTCTCCTAGCAACTGCTACCTTTGGTGGTTCAGTCTCACTTGTTATACAGACATGGACAATTAAGGACTACCCAGAGGAGCTAATGCTAATAACCATTGCTACCAGTTTCTCTGTAATCCTATCTTTCGTAGTTGCTTTCATTGCAGAGCAAAATCCCAAGGCATGGATACTTAAGCCTGATATGGAATTGGTGTGCATATTGTATTCAGCCATTGTAGTGCTGTCTATACGAAGTGTGGTGTATGCATGGGCATGTCGAAAGAAGGGAGCTGTGTATGTTGCTATGTTCAATCCTTTAGGAATTGTGATTGCACTTGCTATGGGGATTGTGTTTCTCGGAGACACTCTATATCTTGGAAGTGTGATCGGAGCTGCTACAATAGCTGTTGGCTTTTATGCTGTAATATGGGGTCAGGCTCAAGAGGAAAACATGACTTGTGAAAAGCACGGAACCTGTGGAATTATCTGTTCATCTTCATCTTGTTCTGAAGTCACCCTCTTACTACATAAAACCAAAGACACAATGGTAGCCTGA 711 0.4191 MEKLDLKLRSCQAKTIGTVVSIAGALTMTLYKGFAVTSNLMQNNLVLSSQQSQWLLGAFLLATATFGGSVSLVIQTWTIKDYPEELMLITIATSFSVILSFVVAFIAEQNPKAWILKPDMELVCILYSAIVVLSIRSVVYAWACRKKGAVYVAMFNPLGIVIALAMGIVFLGDTLYLGSVIGAATIAVGFYAVIWGQAQEENMTCEKHGTCGIICSSSSCSEVTLLLHKTKDTMVA 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium256g00002 236 PANTHER WAT1-RELATED PROTEIN 1 206 IPR030184 GO:0016020|GO:0022857
Vium256g00002 236 Pfam EamA-like transporter family 56 194 IPR000620 GO:0016020
Vium256g00002 236 SUPERFAMILY Multidrug resistance efflux transporter EmrE 112 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium256g00002 Vium-Chr256 3584 7813 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium256g00002 1 203 Nodulin-like Gene Family AT5G40240 41.121 1.03e-50 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium256g00002 - - gmx:100792641 333.569