Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2565g00003 ATGCACAGCAGAAAGGTTATTGTTAGCCATACAAAGATGAATATCAATAGCACAAAAGGGCTTCTTGCACTCTTTGCATTTGTCTTCTTGGGATGGGGTAATGCACAAAATACCCTTGTGCCAGCAATCATAACATTTGGTGACTCAGCCGTGGATGTTGGGAATAATGATTATTTGCCTACCCTTTTCAAGGCGAACTACCTTCCTTATGGAAGGGACTTTGTCAACCATCAACCCACTGGGAGGTTCTGCAATGGGAAACTAGCCACTGATATTACTGCTGAAACGCTTGGTTTTAAGAGTTTTGCACCTGCATATCTTAGCCCTCAGGCTTCAGGGAAGAATCTTCTCATTGGAGCAAACTTTGCTTCAGCAGCCTCTGGTTATGATGAAAAGGCTGCTATTTTGAACCATGCGATTCCACTGTCTCAACAGTTAAAATATTTCAAGGAATATCAAGGCAAGCTGGCCAAGGTTGCTGGCAGTAAAAAAGCAGCGTTTATTATTAAGGATGCGCTGTACATATTGAGTGCTGGCAGTAGTGATTTTGTTCAAAACTATTACGTCAATCCTATAATCAGCAAAGCCTTCACTCCTGATCAGTATTCTGCATACCTTGTTGGTGCATTTTCAATCTTTGTTAAGGATTTGTATAAATTGGGAGCTAGGAGGGTTGGAGTGACTTCACTCCCACCTCTAGGTTGCCTACCAGCTGCAAGAACTTTGTTTGGTTTTCACGAGAATGGTTGTGTCTCGAAGATCAACAATGATGCCCAAGGATTTAACAACAAAATCAAGACAGCCGCAGCAAATCTCCAAAAGCAACTTCCTGGTCTTAAGATTGTTGTCTTTGATATTTTCAAACCTCTTTATGACCTTGTTCAGTCCCCTTCAAAATTTGGTTTTGCCGAGGCAAGGAAAGGTTGCTGTGGTACTGGAATAGTGGAGACAACATCTTTATTGTGCAATCCAAAATCACCAGGAACTTGTTCTAATGCAACCCAATATGTGTTTTGGGATAGCGTCCATCCTTCACAAGCTGCTAACCAAGTTCTAGCCGATGCATTGATTTTACAAGGCATAGCCCTTATCACATAA 1098 0.4171 MHSRKVIVSHTKMNINSTKGLLALFAFVFLGWGNAQNTLVPAIITFGDSAVDVGNNDYLPTLFKANYLPYGRDFVNHQPTGRFCNGKLATDITAETLGFKSFAPAYLSPQASGKNLLIGANFASAASGYDEKAAILNHAIPLSQQLKYFKEYQGKLAKVAGSKKAAFIIKDALYILSAGSSDFVQNYYVNPIISKAFTPDQYSAYLVGAFSIFVKDLYKLGARRVGVTSLPPLGCLPAARTLFGFHENGCVSKINNDAQGFNNKIKTAAANLQKQLPGLKIVVFDIFKPLYDLVQSPSKFGFAEARKGCCGTGIVETTSLLCNPKSPGTCSNATQYVFWDSVHPSQAANQVLADALILQGIALIT 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2565g00003 365 Pfam GDSL-like Lipase/Acylhydrolase 43 355 IPR001087 GO:0016788
Vium2565g00003 365 PANTHER GDSL ESTERASE/LIPASE EXL3 28 356 - -
Vium2565g00003 365 SUPERFAMILY SGNH hydrolase 133 356 - -
Vium2565g00003 365 FunFam GDSL esterase/lipase APG 32 361 - -
Vium2565g00003 365 CDD SGNH_plant_lipase_like 41 357 IPR035669 -
Vium2565g00003 365 Gene3D SGNH hydrolase 33 360 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2565g00003 Vium-Chr2565 16738 18495 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2565g00003 21 357 Pollen Coat Proteome AT1G75910 34.118 1.11e-62 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2565g00003 - - gmx:100795716 661.759