Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2562g00001 ATGGAGGCACTATCCCTTCTTCCCATAAACACTCTCTCAATTAACCACATTTCTCTCACTGCTTCTTCTAATTATGTTTCGCTCTATTCTTCCTTACAACTCAATCCTTCTCTCACTGCTAGAACCCTCACTTTGAGAAAAAGCGTCGTTCGTGTACAAGCCGAGAGTGAAGATTATGAATTGAAGCAAATGAGGGATATGGCTGCTGCCAGAAAGAGATGGGAGGCTCTGGTCAGAGATGGAAAAGTTAAAGTTCTTATCCCAAGGGAAGCTGGGTACGCAGTTCAGCTTTCAGGCAAGCCCCTTCTTGATGTCCGTCCCTCCAATGAGCGCAACAAGGCATGGGTGAGAGCTTCAACCTGGATTCCAATATTTGATGTTGATAATAAGCTAGATTTTGGAACCGTTCCCAGAAAAGTCACAAATTTTGTTATGGGAGGTTGGTGGAGTGGCATGCCTACTCTATCTTATGACAGCCAGTTCTTAACCAAAGTTGCGGAAAAGTTCCCCAAAGATTCTGAATTAATTGTTGCATGCCAGAAGGGATTGAGATCACTTGCTGCTTGTGAACTACTGTATAATGCTGGCTACAAAAATCTGTTTTGGGTTCAAGGAGGATTTGAAGCTGCTGAAGAAGAGGATCTCATTGTAGAGGGCCCATCACCTCTCAAATTTGCTGGAATTGGTGGAGTGTCAGAATTTCTTGGGTAA 711 0.436 MEALSLLPINTLSINHISLTASSNYVSLYSSLQLNPSLTARTLTLRKSVVRVQAESEDYELKQMRDMAAARKRWEALVRDGKVKVLIPREAGYAVQLSGKPLLDVRPSNERNKAWVRASTWIPIFDVDNKLDFGTVPRKVTNFVMGGWWSGMPTLSYDSQFLTKVAEKFPKDSELIVACQKGLRSLAACELLYNAGYKNLFWVQGGFEAAEEEDLIVEGPSPLKFAGIGGVSEFLG 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2562g00001 236 SMART rhod_4 86 216 IPR001763 -
Vium2562g00001 236 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 11, CHLOROPLASTIC 24 236 IPR044664 -
Vium2562g00001 236 Gene3D - 84 222 IPR036873 -
Vium2562g00001 236 Pfam Rhodanese-like domain 94 209 IPR001763 -
Vium2562g00001 236 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 95 209 IPR036873 -
Vium2562g00001 236 ProSiteProfiles Rhodanese domain profile. 96 218 IPR001763 -
Vium2562g00001 236 CDD RHOD 102 209 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2562g00001 1 236 Sulfurtransferasese or Rhodanese AT4G24750 64.198 8.21e-108 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2562g00001 - - vum:124830931 470.7