Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2561g00005 ATGAATTCTAGGTGCTTCCTTCATCAACAACAAGACTTTAGCATGGTTCCATTTTCTTCAAATTCTGTCACAGAAGATAGAATTGCTGGTGCTCGAAATAGGCCTCCACGTGTCACCCCTCCTTCCTTCTTGGTTCGGGTGGCCATGAGAATATCTAGAGCAAGATGGTTTACCTTTTTGAGAAGAGTTTTTCATTACCAAAATGGATCAAGGTCTAATCTTGGCTCCAACCCTTTCAATTCTAGCACTTGGATGATGCTGGAGTTTATTGCCTTGGTTGTTCAAATAACTATTACAACATTCACCTTGGCCATTTCCAAGAGGGAGAGACCTATTTGGCCTATGAGGATTTGGATTTCTGGTTATGATATTGGTGTTGTTCTTAACCTTCTGCTACTTTACGGGCGCTATCGTCAAACTTATCTCACGCAAGGCCTTTCTGATATAGAACAGCAGAGAAACCATGAAGAAACCAGTGTGTACAGGATGTCACACTTGATGAACAGATGTCGGACTTCGCTTGAGCTTTTCTTTGCCATATGGTTTGTGATGGGAAATGTTTGGGTTTTTGACTCACGTTTTGGATCTTTTCAACAAGCTCCAAAACTGCATGTGCTCTGCATCACTCTTCTTGCTTGGAATGCAGTGTGCTACTCTTTCCCTTTTCTACTGTTTCTGCTGCTGTGCTGTTTTGTGCCTCTCATCAGCACCCTCCTTGGCTACAACATGAATATAGCCTCTTTTGATAAAGGAGCTTCTGATGATCAAATTTCACAGCTTCCAAGCTGGAGACACAAAGAAGGTCGTGCAAAGTTAGAGCTTGGAAATGACTCTGATGGGAGTGAAAAACTGATTGATGAAGACCAAATATGTTTGTGTTCTGATGTGCTTACAGGAATGTTGTATCTGCTTAACCAAGTATAA 924 0.4167 MNSRCFLHQQQDFSMVPFSSNSVTEDRIAGARNRPPRVTPPSFLVRVAMRISRARWFTFLRRVFHYQNGSRSNLGSNPFNSSTWMMLEFIALVVQITITTFTLAISKRERPIWPMRIWISGYDIGVVLNLLLLYGRYRQTYLTQGLSDIEQQRNHEETSVYRMSHLMNRCRTSLELFFAIWFVMGNVWVFDSRFGSFQQAPKLHVLCITLLAWNAVCYSFPFLLFLLLCCFVPLISTLLGYNMNIASFDKGASDDQISQLPSWRHKEGRAKLELGNDSDGSEKLIDEDQICLCSDVLTGMLYLLNQV 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2561g00005 307 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 12 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2561g00005 Vium-Chr2561 22440 25409 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2561g00005 39 266 C3H Transcription Factor Family AT5G55970 75.107 1.44e-121 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2561g00005 - - gmx:100775217 510.76