Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2523g00004 ATGGAAAAGCTGGACCTAAAACTAAGAAGCAGTCAAGCAAAAACCATTGGGACTGTGGTCTCAATTGCAGGGGCATTAACGGTGACTTTATACAAAGGTTTGCCTATAACAACTCATGTGATGCGACACAACTTATTTCTCTCATCTCAACAATCACAATGGCTACTAGGAGGATGTATCCTATCAACTGCTACCTTTACTGCTTCAGTCTTAATTGTTATTCAGACATGGACAATTAAGGACTACCCAGAGGAGCTAATTCTAATTAGCATTGCTACCAGTTTCTCTTTATTCCTATCTTTCGTAGTTGCTTTCATTGCAGAGAAAAATCCCAAGGCATGGATACTTAAGCCTGATATGGAACTGGTGTGCATATTGTGTACAGCCATTATAACAGTATGTACACGAGGTGTGGTTGATGCATGGGCATGTAGAAAGATGGGAGCTGTATATGTTGCTATGTTCAGTCCTTTAGGAATTGTGTTTGCACTTGTTATGGGGATTATATTTCTGGGAGACACTCTTTATCTTGGAAGTGTGATAGGATGTGCTGTAATAGCTATCGGATTTTATGCTGTATTATGGGGTCAGGCTCAAGAGGAAAATAAGACTAGTCAAAAAGATGGAGCCTATGGCATTATCCCTTCATCTGAAACCACCCTCTTACTGCATACAAGCAAAGACACAATGATAACATAA 699 0.3977 MEKLDLKLRSSQAKTIGTVVSIAGALTVTLYKGLPITTHVMRHNLFLSSQQSQWLLGGCILSTATFTASVLIVIQTWTIKDYPEELILISIATSFSLFLSFVVAFIAEKNPKAWILKPDMELVCILCTAIITVCTRGVVDAWACRKMGAVYVAMFSPLGIVFALVMGIIFLGDTLYLGSVIGCAVIAIGFYAVLWGQAQEENKTSQKDGAYGIIPSSETTLLLHTSKDTMIT 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2523g00004 232 Pfam EamA-like transporter family 58 194 IPR000620 GO:0016020
Vium2523g00004 232 SUPERFAMILY Multidrug resistance efflux transporter EmrE 114 198 - -
Vium2523g00004 232 PANTHER WAT1-RELATED PROTEIN 1 205 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2523g00004 Vium-Chr2523 103161 115921 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2523g00004 1 202 Nodulin-like Gene Family AT5G40240 38.605 2.43e-46 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2523g00004 - - vum:124830837 442.58