Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2523g00003 ATGGCTTATGTTGGAATTGAACTGAGCTCGCCGACACTTGCATCAGCCCTTCTTAACCTCGTTCCAGCTTTCACTTTTATACTTGCTCTCATTTTCAGGATGGAAGAAGTACGGTGGAGGAACTCAAGCAGCCAAGCTAAAGTGTTAGGAACAGTAGCATCAATTGCAGGAGCATTTGTTGTGATACTGTACAAGGGTCCTCTCATCTTTAAGACGCATTCGACTAACTTTTCTAACCAAATCCTTCAATTTTCAGCACAGCTAAATTGGATCTTAGGAGGGATATTCTGCATTGCAGATTCACTTTTTACTTCCATGTGGTACATATATCAGGCTTCGGTAGCAAAGAAATACCCTGCTGTAACAGTGATTGTATTCTTCCAACTCTTATCTTCAACCGTGCAGTGTGGAGTATTTGCCTTAATTGCTGTGAGGGATCCGACTGAATGGAAGCTCAACTTGGATATAGGGCTGATTGGCGTTCTATATCAGGCAATAGTTGCAACGATGATACGTTACCTACTATGCACATGGTGCGTCCTTAAAGCAGGTCCTCTGTTTTGTTCTATGTTCAAACCTGTGGCAATCATTTTCACCACTTTCATGGGTGCAATCTTTCTTGGAGATGATTTCAGTCTTGGAAGTTTGATTGGTGCGGTTATAATCGTGGTTGGATTTTATGCTGTATTGTGGGGGAAATCGAAAGAGGAGAATGAGATTGCAAAAGGGGTTGAGAACTTGGAGTCACCATGCCATAATGTTCCTTTGTTGCAAGATAGGAACAGGTTCAAGCTGTGA 798 0.4223 MAYVGIELSSPTLASALLNLVPAFTFILALIFRMEEVRWRNSSSQAKVLGTVASIAGAFVVILYKGPLIFKTHSTNFSNQILQFSAQLNWILGGIFCIADSLFTSMWYIYQASVAKKYPAVTVIVFFQLLSSTVQCGVFALIAVRDPTEWKLNLDIGLIGVLYQAIVATMIRYLLCTWCVLKAGPLFCSMFKPVAIIFTTFMGAIFLGDDFSLGSLIGAVIIVVGFYAVLWGKSKEENEIAKGVENLESPCHNVPLLQDRNRFKL 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2523g00003 265 PANTHER WAT1-RELATED PROTEIN 1 241 IPR030184 GO:0016020|GO:0022857
Vium2523g00003 265 Pfam EamA-like transporter family 93 230 IPR000620 GO:0016020
Vium2523g00003 265 SUPERFAMILY Multidrug resistance efflux transporter EmrE 154 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2523g00003 Vium-Chr2523 41781 44367 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2523g00003 5 259 Nodulin-like Gene Family AT5G40240 41.221 1.04e-62 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2523g00003 - - gmx:100792109 432.565