Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2515g00050 ATGCCGAAAATGGGACTCAAAAGCTTATTCCTCTTTAAAACATCACCATCACCACCTTCTGCAAAGCCCTTCTCCCACTCCTTATTGGACGAAAACATTGAAATTGCACGCTCTATCATTTCCAAATGGGACCCTATTCCTTCTTCTCACCAAACTTCTTCTCTCAAACCAGCAACCGTTCCTCTTTTCAGCAACACGCGTCAGGAAGCCAAACAGTACCTTAAGGCCGTTACGAGTCTGCAGTCCACTATGCATCACCTCGTTGCACTCGATTCCTCCTCCGAGAGCCTCGTTCAAGCCCAATTCCTAATGCAACTCGCCATGAAGAGGCTCCAAACCGAATTCTATCGGATTTTAGCCGAAAACAAGGACAATCTCGATCCTGAATCCGTCATTTCCACCGATCGACGGAGCAGCAGTGTCTCCGAGGACGAAGACAATTTTTCAGAGGACGAGTACCGCTTCGCCGGCAGCACGGTATCCACTGTCGCCATGGCGGATTTGAAAGCCATTGCGGAGTGTATGGTTTCCGCGGGATACAGCAAAGAGTGCGTCAAGATTTATATCATAATGAGGAAATCGATCGTGGATGAGGCGCTGTATCATTTAGGAGTGGAGAGGCTGAGTTTTTCTCAGGTTCAGAAGATGGACTGGGGGGTTCTGGAGTCTAAGATTAAGTGCTGGGTGAACTCCATCCAGGTTGCCGCACAAACTCTGTTTCGCGGCGAGAAATCGCTCTGCGACTACGTTTTCGGTTCGGCGGAGAGGAAGATCGCGGACTCGTGTTTTGCCGCGATTTGCAGAGATGGCGCGGCGACGCTGTTCGGCTTTCCGGATAACGTGGCGAAGTGCAAGAAAACGACAGAGAAAACGTTCAGGATGCTGGACTTGTACAACGCGATCTGTGAAAATCAACAACAAATCCACTCCATCTTCTCGTCCGAATCAACCTCCTCCATCGTATTACAGGTGTGCGCTTCAAAGGCGAGGCTTGGCGAGGTCATTCGGACGATGTTAATCAACTTTGAATCCGCGATTCACAAGGAATCTTCGAAGATTCCAGTGCCTGGAGGTGGAATCCACCCGGTCACGCGCTACGTCATGAACTACATCGCGTTCCTCGCCGATTACAAGGACGCGCTCGCCGAGATAGTTGACGATTGGCCGCAGAATCCGTTGCCGGAGTCTTACTACCGCAGTTGCGATCGCGAGGGAGTGAATCGCTCGTCGGGGATAGCGGAACGGATCGCGTGGCTGATATTGGTGCTCCTCTGCAAACTCGATGCCAAAGCGGAACTGTACAAGGAGGTTGCGCTTTCCTACCTGTTTCTCGCAAACAACATGCAATACGTCGTCGTAAAAGCGCGAACCTCGAACCTAGGGTTAATCCTCGGCGAACATTGGTTAACGAAACACGAGCTGAGGGTGAAAGAGTACGTTTCCAAGTACGAGAGCGTTGGATGGAGCAAGGTTTTTTCGACTCCCCCGGAAAACCCAACGGCGGAACAAGCGAGGGCAATTCTCGAGAGTTTCGTGTTCGCATTCCGTGAAGCGTGCAGGGCACAATCATCGTGGGTCGTGCCCGACCCGAATCTGCGTGACGAAATAAAAGCATCGATAGCTACTAAGTTAGAACCAATGTACAAAGTGTTTTTGGAGAAATATCAGCTCGGGCCGGATGCGGTTTTCGGTTGTTCGCCCGATGATTTCGAAAAAACTATCTCAGATATTTTAACGGGTTGCGTTTCGTCGTCGCAGACAGCTCCTTCTCCACCGCATCGCTTCAAACGCCGGTGA 1797 0.5081 MPKMGLKSLFLFKTSPSPPSAKPFSHSLLDENIEIARSIISKWDPIPSSHQTSSLKPATVPLFSNTRQEAKQYLKAVTSLQSTMHHLVALDSSSESLVQAQFLMQLAMKRLQTEFYRILAENKDNLDPESVISTDRRSSSVSEDEDNFSEDEYRFAGSTVSTVAMADLKAIAECMVSAGYSKECVKIYIIMRKSIVDEALYHLGVERLSFSQVQKMDWGVLESKIKCWVNSIQVAAQTLFRGEKSLCDYVFGSAERKIADSCFAAICRDGAATLFGFPDNVAKCKKTTEKTFRMLDLYNAICENQQQIHSIFSSESTSSIVLQVCASKARLGEVIRTMLINFESAIHKESSKIPVPGGGIHPVTRYVMNYIAFLADYKDALAEIVDDWPQNPLPESYYRSCDREGVNRSSGIAERIAWLILVLLCKLDAKAELYKEVALSYLFLANNMQYVVVKARTSNLGLILGEHWLTKHELRVKEYVSKYESVGWSKVFSTPPENPTAEQARAILESFVFAFREACRAQSSWVVPDPNLRDEIKASIATKLEPMYKVFLEKYQLGPDAVFGCSPDDFEKTISDILTGCVSSSQTAPSPPHRFKRR 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2515g00050 598 PANTHER EXOCYST COMPLEX PROTEIN EXO70 22 571 IPR004140 GO:0000145|GO:0006887
Vium2515g00050 598 Gene3D Exocyst complex component Exo70 54 587 - -
Vium2515g00050 598 Pfam Exo70 exocyst complex subunit 227 576 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vium2515g00050 598 SUPERFAMILY Cullin repeat-like 60 576 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2515g00050 Vium-Chr2515 351621 354105 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2515g00050 11 580 EXO70 exocyst subunit family AT5G59730 44.975 1.03e-164 482
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2515g00050 K07195 - gmx:100801773 884.019