Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2515g00009 ATGGAGCAGTTCATCGAAAACCTGCCGCCGATGGATCTGATGCGATCTGAGAAGATGACCTTTATTCAGCTCATCATTCCGGCCGAGTCCGCACACCGCGCCATCTCCTATTTAGGCGAACTCGGTCTTCTCCAATTCCGCGACTTAAATGCTGATAAAAGTCCCTTCCAGAGAACATTTGTTAATCAGGTCAAACGATGTGCAGAAATGTCAAGAAAACTAAGATTCTTCAAGGATCAAATCAGTAAAGCTGGCCTCTTGTCTTCTTCTCGTACTGCATTGCAACCAGATATTGACTTGGAGGATTTGGAGATACAACTTGCTGAACATGAACATGAGCTGATTGAAATGAACTCTAATAGTGATAAACTCCGGCAATCATATAATGAACTCTTGGAATTCAAGATTGTATTACAAAAGGCATGTGGCTTTCTTGTTTCAAGTCATAACCTTGCACTTTCAGATGAAAGAGAACTACAAGAGAATGTATTTTCAAATGATGCCTATGTAGAGACAGCATCTTTGCTTGAACAGGAAAGGAGGCCTCAGTCATCAAATTCGTCTGGTTTAAGATTTATCAGTGGGATAATCTGTAAATCCAAGGTTCTTAGGTTTGAAAGAATGTTATTTCGTGCTACAAGAGGCAATATGCTATTCAACCAGGAACCAGCTGATGAACAAATCATGGATCCTGCTTCAACTGAGATGATTGAAAAAACAGTGTTTGTCGTGTTTTTCTCTGGGGAACAGGCAAGAACAAAGATTCTGAAAATTTGTGAGGCATTCGGTGCAAATTGTTATCCTGTTCCTGAAGATATTAGCAAGCAGAGGCAAATAACTAGAGAGGTTTCATCCCGTCTTACAGACTTAGAGGCAACTTTGGAAGCCGGGATTAGGCACCGGAACAAGGCTCTAGCTTCTGTTGCAGACCATCTAGGGAAATGGATGAACATGGTAAGAAGAGAGAAGGCTGTGTACGATACACTGAACATGTTAAACTTCGATGTTACAAAAAAATGTCTTGTGGGAGAGGGCTGGTGCCCTCTGCTTGCCAAAACACAGATGCAGGAGGCACTGCAACGTGCAACTTTTGATAGCAATTCTCAAGTTGGCATAATCTTCCATCCACTAGAGGCAGTGGAATCACCACCTACATACTTTCGGACCAACACTTTCACAAATCCATATCAAGAAATTGTTGATGCATACGGTGTTGCAAGATACCAAGAGGCGAATCCTGCAGTTTACACAACTATTATATTCCCTTTCCTATTTGCTATGATGTTTGGGGACTGGGGTCATGGAATTTGCCTGTTGCTAGGAGCATTGGTTCTTATAGCACGTGAAAACAAGCTCAGCACACAGAAACTTGGAAGCTTTATGGAGATGCTGTTTGGTGGGCGCTATGTGATTCTTCTAATGGCTCTATTTTCAATCTATTGTGGCTTAATCTACAATGAATTCTTCTCTGTCCCTTTCCACATATTTGGTGCATCTGCATACAAATGCCGCGATAGTTCTTGCAGGGATGCACATACTATTGGTTTAGTCAAATACCAAGATCCATACCCATTTGGTGTGGATCCCAGCTGGCGTGGAAGTCGTTCAGAATTGCCTTTCCTGAATTCTTTGAAGATGAAGATGTCCATTTTGTTTGGTGTCGCACATATGAACTTAGGAATTATATTAAGTTATTTTAATGCACGGTTCTTTGGAAGCTCATTGGATATAAGGTACCAGTTTGTGCCACAGATGATTTTCCTTAACTGTCTATTTGGGTATCTTTCCCTTCTCATTGTTGTTAAGTGGTGTACTGGCTCTCAAGCAGACCTTTATCATGTAATGATATACATGTTTTTAAGCCCGACGGACAATCTTGGCGAGAATCAGTTGTTCTGGGGCCAAAGACCACTTCAAATTGTGTTATTGCTTTTGGCTGTAATTGCAGTTCCATGGATGCTCTTTCCAAAACCTTTTATATTAAAGAAGCTTCATACTGAGAGATTTCAAGGTCGTAGTTATGGCTTACTGAACACTTCTGAGGTGGATCTTGAGGCTGAGCCTGATTCTGCCAGACAACATCATGAAGAATTCAATTTCAGTGAAGTCTTTGTTCACCAAATGATCCATTCCATTGAATTTGTTCTAGGTTCTGTTTCTAATACAGCATCATATCTTCGTCTTTGGGCATTAAGTTTGGCTCACTCTGAACTTTCTACTGTTTTCTATGAGAAAGTCCTGCTTTTAGCTTGGGGATATGACAATCTTATCATTCGGTTGGTGGGGCTCACCGTTTTCTCCTTTGCAACTGCCTTTATACTACTAATGATGGAGAGTCTTAGTGCTTTTCTTCATGCGCTGCGGCTTCACTGGGTAGAATTCCAAAATAAATTCTACCATGGCGATGGCTATAAGTTCAGACCTTTTTCATTTGCTTCCTTAACGGAGGAAGATGATTGA 2460 0.411 MEQFIENLPPMDLMRSEKMTFIQLIIPAESAHRAISYLGELGLLQFRDLNADKSPFQRTFVNQVKRCAEMSRKLRFFKDQISKAGLLSSSRTALQPDIDLEDLEIQLAEHEHELIEMNSNSDKLRQSYNELLEFKIVLQKACGFLVSSHNLALSDERELQENVFSNDAYVETASLLEQERRPQSSNSSGLRFISGIICKSKVLRFERMLFRATRGNMLFNQEPADEQIMDPASTEMIEKTVFVVFFSGEQARTKILKICEAFGANCYPVPEDISKQRQITREVSSRLTDLEATLEAGIRHRNKALASVADHLGKWMNMVRREKAVYDTLNMLNFDVTKKCLVGEGWCPLLAKTQMQEALQRATFDSNSQVGIIFHPLEAVESPPTYFRTNTFTNPYQEIVDAYGVARYQEANPAVYTTIIFPFLFAMMFGDWGHGICLLLGALVLIARENKLSTQKLGSFMEMLFGGRYVILLMALFSIYCGLIYNEFFSVPFHIFGASAYKCRDSSCRDAHTIGLVKYQDPYPFGVDPSWRGSRSELPFLNSLKMKMSILFGVAHMNLGIILSYFNARFFGSSLDIRYQFVPQMIFLNCLFGYLSLLIVVKWCTGSQADLYHVMIYMFLSPTDNLGENQLFWGQRPLQIVLLLLAVIAVPWMLFPKPFILKKLHTERFQGRSYGLLNTSEVDLEAEPDSARQHHEEFNFSEVFVHQMIHSIEFVLGSVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYDNLIIRLVGLTVFSFATAFILLMMESLSAFLHALRLHWVEFQNKFYHGDGYKFRPFSFASLTEEDD 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2515g00009 819 Coils Coil 100 127 - -
Vium2515g00009 819 PANTHER VACUOLAR PROTON ATPASES 13 818 IPR002490 GO:0033179|GO:0046961|GO:1902600
Vium2515g00009 819 Pfam V-type ATPase 116kDa subunit family 37 811 IPR002490 GO:0033179|GO:0046961|GO:1902600
Vium2515g00009 819 PIRSF ATP6V0A1 9 819 IPR026028 GO:0000220|GO:0046961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2515g00009 Vium-Chr2515 33910 59085 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2515g00009 1 812 Primary Pumps ATPases(2) AT2G28520 80.613 0.0 1369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2515g00009 K02154 - gmx:100793301 1560.43