Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium250g00015 ATGGAACTTCCAGATTGTGTATATCCTAGGCCATCAGTTACCATATTCCCATGTGCTCCAACACCAAAGCATTCTCTCCATCTATCCAATCTCGACAGCCAAAAGTTCTTCAGATTCTCCGTTAAGTATGTGCACCTCTTCGAGAAATGTGTGAGCGTGGATGTGTTGAAGTCTTCTCTGTCAAGAGTTTTGGTGGATTACTACCCCTTAGCTGGGAGATTGAGGAGGAGCAGCATTTGTGAGGATGATCACAAGCTTGAGGTGGATTGCAATGGAGAAGGTGTTGCGTTTGCTGAGGCTTTCATGGATGCCACTGCTCAACAATTACTTCAACCTTGCAACCTGCCAAACACTTCATGGAAGAAGCTCCTTTGCAGAGTCGAAGCTCAAAGTTTCTTAGATCTTCCTCCTCTTATAATCCAGGTGACAAGTCTCCGATGCGGAGGGATGATACTGTGCACGGCGATCAACCACTGTCTTTGCGACGGCACCGGCGCGTCCCAATTCCTACACGATTGGGCTCGTCTCGCTAGAGATCCCAACACTGAATTACCAGTCACACCCTTCCACGGGCGACACGTGTTGAATCCTCGAGACCCTCCCCAGGTGCACTTCACCCACGCGGGATACACCAGAACAAACCCTGCGTCTCATCAAGTGGACCTGCACGATTGGATGGTGCACTCGCAGCCGCTGGTCGTCACGTCATTCACATTCGGAACCTCCGAGGTTCTTCTGTTGAAGAAACAGTGTTTGTCGTGGCCGAAGCCCATCACCACCTTCGAAAGCGTGGCGGCACACACGTGGCGTGCGTGGGTTAAATCAATGAATCTCTCCCCCACGATAACAGTTAAACTCATTTTCACCGTTAACGTTAGGAAAAAGGTTAACCTCCCAGAAGGGTATTATGGGAACGGGTTTGTTCTGGCATGCGCAGAGAGCACAGTGAGAGGTTTAACAGCAGTTGAAAATGATGATGGCGATGATATCAGTCACAGTTTGAAAGCGTTGCAAGAAGCTAAGGCTATTTTAGAGGAGAAAGGGTATATAAGGTCGATGGTTGATTTGTTGGAGGACAAAACGGTGCGTGTTGATCTTTCGACGAGTTTGGTTATATCGCAATGGTCAAGGCTAGGGTTGGAGGACGTGGATTTCGGATTAGGAAAACCCTTGTTTATGGGTCCTTTATCAAGCTATGTTCATTGTTTGTTTTTACCGGTGGTTGGAGATTCTAATGCAGTCAGAGTGCTCGTGTCTGTTCCTGAAAGTGTTGTGGAAAGTTTTCGTTACCACATGCTCGTGAAAGACGGTTGGAAAAAACAAGAGAATGATGGTTAG 1338 0.4776 MELPDCVYPRPSVTIFPCAPTPKHSLHLSNLDSQKFFRFSVKYVHLFEKCVSVDVLKSSLSRVLVDYYPLAGRLRRSSICEDDHKLEVDCNGEGVAFAEAFMDATAQQLLQPCNLPNTSWKKLLCRVEAQSFLDLPPLIIQVTSLRCGGMILCTAINHCLCDGTGASQFLHDWARLARDPNTELPVTPFHGRHVLNPRDPPQVHFTHAGYTRTNPASHQVDLHDWMVHSQPLVVTSFTFGTSEVLLLKKQCLSWPKPITTFESVAAHTWRAWVKSMNLSPTITVKLIFTVNVRKKVNLPEGYYGNGFVLACAESTVRGLTAVENDDGDDISHSLKALQEAKAILEEKGYIRSMVDLLEDKTVRVDLSTSLVISQWSRLGLEDVDFGLGKPLFMGPLSSYVHCLFLPVVGDSNAVRVLVSVPESVVESFRYHMLVKDGWKKQENDG 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium250g00015 445 Gene3D - 9 212 IPR023213 -
Vium250g00015 445 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 16 422 - -
Vium250g00015 445 SUPERFAMILY CoA-dependent acyltransferases 13 185 - -
Vium250g00015 445 Pfam Transferase family 13 432 - -
Vium250g00015 445 Gene3D - 226 433 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium250g00015 Vium-Chr250 142903 144771 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium250g00015 10 395 Monolignol Biosynthesis Gene Families AT5G48930 29.167 3.78e-42 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium250g00015 - - gmx:100797134 661.373