Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2507g00001 ATGTTGTTACCACTGTTTGTCTGTCTTATTATTCTCCCTGTGCTGTTCTTGTTCTTCATCCATAATCTAAGAACCTTCAAGAACACAACCAGCCCTCCAGGTCCTAAACGCCTTCCAATCATAGGAAACTTGCATCAGTTAGATAACTCCATTCTTTATCTGCAGTTATGGCAACTCTCAAAGAAATATGGACCTATATTTTCCCTTCAATTAGGGTTCAGACAAGCTATTGTAGTCTCCTCCCCTAAACTAGCAAAAGAGGTACTAAAAATCCATGACCTTCAGCTCAGTTCAAGACCTAAACTACATGGCCAGCAGAAACTCTCCTACAATGAGTCAGAGATTGCATTCTCCTCAAACACTGAAAATTGGAGAGAAATCAGAAAAATTTGTGTTGTTCATCTCTTTAGCTCCAAGCGTGTCTCTACCTTTTCGTACATAAGAAAGTTTGAGGTGAAGCAAATGATCAAAAAAATATCTGGGCATGCATCTTCTTCGGGTGTTACAAACTTGAGTGAACTGTTACTTTCTTTCTCAAGTACTGTGGTTTGTAGAATTGCTTTTGGGAGAAGGTACGAGGATGAAGGAAGTGAAAAGAGTAGGTTCCATGTGTTGCTGAATGAGCTTCAAGCCATGATGGGTACCTTCTTTGTTTCCGATTATATTCCATTGATGGGTTGGGTTGATAAACTCAGTGGATTGAACGCACGTCTTGAACGAAACTTCAATGAGTTCGATAGGTTCTACCAAGATGTGATTGATGAACACATGGATCCAAATAGAGAATATGCGGAAGAACAGGCTATGGTTGATTTGTTGCTTCAACTGAAGAATGATCGTTCGCTTCCAATTGATATCACTTTTGATCACATCAAAGGGGTTCTCATGAACATACTTGCAGCAGGGACAGATACCACAGCAGCCACATTAGTTTGGATTATGACTGCCCTTGTAAAAAACCCAAGAGTAATGAAGAAACTTCAAGAGGAAATCAGAAACGTGGGAGGTAAAAAAGATTTCTTGGATGAAGATGACACTCAGAAACTTTCTTACTTGAAGGCTACGATAAAAGAGACACTTAGATTGCACCCACCAGGCCCACTACTTGTACCAAGAGAATCAACAGAAGAGTGCATTATTAATGGCTACCGAATTCCAGCTAAAACAATTGTGTTTGTGAATGTTTGGGCTATTCAAAGAGATCCTGAAGCTTGGAAAAATCCTCAAGAGTTTTGTCCTGAAAGATTCTTAGACAGAGCTATAGATTTTCATGGACAAGATTTCGAACTGATTCCGTTTGGATCAGGTCGTAGAATTTGCCCTGGTATAGCTATGTCTGTTGTGACATTAGAACTTGTCGTTGCTAATCTTCTTCATTCCTTTGATTGGGAATTGCCTCAAGGGATGGTAAGGAAAGACATTGATCTTGAAGTGTTGCCAGGAATTACCCAACACAAGAAGAATCATCTTTGTCTTTGTGCCAAGACTATGTTCAATATATAA 1503 0.3952 MLLPLFVCLIILPVLFLFFIHNLRTFKNTTSPPGPKRLPIIGNLHQLDNSILYLQLWQLSKKYGPIFSLQLGFRQAIVVSSPKLAKEVLKIHDLQLSSRPKLHGQQKLSYNESEIAFSSNTENWREIRKICVVHLFSSKRVSTFSYIRKFEVKQMIKKISGHASSSGVTNLSELLLSFSSTVVCRIAFGRRYEDEGSEKSRFHVLLNELQAMMGTFFVSDYIPLMGWVDKLSGLNARLERNFNEFDRFYQDVIDEHMDPNREYAEEQAMVDLLLQLKNDRSLPIDITFDHIKGVLMNILAAGTDTTAATLVWIMTALVKNPRVMKKLQEEIRNVGGKKDFLDEDDTQKLSYLKATIKETLRLHPPGPLLVPRESTEECIINGYRIPAKTIVFVNVWAIQRDPEAWKNPQEFCPERFLDRAIDFHGQDFELIPFGSGRRICPGIAMSVVTLELVVANLLHSFDWELPQGMVRKDIDLEVLPGITQHKKNHLCLCAKTMFNI 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2507g00001 500 PANTHER CYTOCHROME P450 71B11-RELATED 16 494 - -
Vium2507g00001 500 Coils Coil 324 344 - -
Vium2507g00001 500 Gene3D Cytochrome P450 20 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2507g00001 500 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2507g00001 500 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2507g00001 500 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2507g00001 500 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2507g00001 500 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2507g00001 500 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2507g00001 500 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2507g00001 500 PRINTS E-class P450 group I signature 178 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2507g00001 500 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2507g00001 500 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2507g00001 500 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2507g00001 500 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2507g00001 500 FunFam Cytochrome P450 83B1 18 493 - -
Vium2507g00001 500 CDD CYP71-like 62 490 - -
Vium2507g00001 500 Pfam Cytochrome P450 32 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2507g00001 500 SUPERFAMILY Cytochrome P450 32 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2507g00001 500 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2507g00001 Vium-Chr2507 33236 41687 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2507g00001 18 493 Cytochrome P450 AT4G31500 48.643 1.26e-170 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2507g00001 - - gmx:100778293 811.216