Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2499g00003 ATGTCAGAATCAAACGCAATTGCAAATGGATTGGCTGGTGCAGGTGGTGGAATCATTGCTCAAATCATCACTTATCCTCTTCAAACGGTAAACACGCGTCAGCAAACTGAGAGAACACTCAAGAGGAACAAGCAAAGTTTGCCCTCTAACACAACCACTGCTCCTGGCACTCTTCTTCAGATCTTTCAGGTCATTAGAACTGAGGGTTGGGGTGGACTCTACAGTGGCCTCAAGCCTTCTCTTCTTGGAACTGCTGCTTCTCAGGGCATTTACTACTATTTCTATCAAGTTTTCAAGAACAAGGCAGTGGCGATTGCAGCTGCACGGAAAGTGAAAGGGCGTGGAGATGGTACTGTTGGGATGTTTGGTTGGCTTGTTGTGGCTGCAATTGCTGGGTCCTTGAATGTGTTGCTGACAAATCCAATATGGGTTTTAGTGACTCGGATGCAGACTCATACTCAAGCAGAAAGGAAAATTATGGAGGAAAAGAAAGAAGCTTTAAGGAAGGCTGCTTCTGAAAGCGCCATAGCAGATTCCACATTGCAAGATAAATTGGATGAACTGAATTCTATAAAACCTCGACCATTTGGAACTATACATGCAGCTAAAGAAGTCTACAATGAAGCGGGTACAGTAGGATTTTGGAAGGGTGTCTTCCCTGCCCTTATTATGGTATGTAATCCATCGATTCAGTTTATGATTTATGAAAGCTCATTAAAGCATCTAAGGGCAAAACGTGCCGCTAAGAAGCAAGGGAATACAAGTATATCCGCTTTGGAGTCAAGGCTTCAAGCAAAACAGGAGATTGGTGGAAATAAATCCTTAAGATACTCAGGTACTTTTGATGCTGTACTTAAAATGATCCGTTATGAAGGAATAACTGGCTTCTATAAGGGGATGAGCACAAAGATAGTGCAGAGTGTTTTTGCAGCCTCTGTTCTATTTATGATCAAAGAGGAGCTTGTTAAGGCTTTTATAGTTCTAACCAATAAGAGCAAAAAAGTTTCATCAAATTTGAGTAGTTGA 1026 0.4181 MSESNAIANGLAGAGGGIIAQIITYPLQTVNTRQQTERTLKRNKQSLPSNTTTAPGTLLQIFQVIRTEGWGGLYSGLKPSLLGTAASQGIYYYFYQVFKNKAVAIAAARKVKGRGDGTVGMFGWLVVAAIAGSLNVLLTNPIWVLVTRMQTHTQAERKIMEEKKEALRKAASESAIADSTLQDKLDELNSIKPRPFGTIHAAKEVYNEAGTVGFWKGVFPALIMVCNPSIQFMIYESSLKHLRAKRAAKKQGNTSISALESRLQAKQEIGGNKSLRYSGTFDAVLKMIRYEGITGFYKGMSTKIVQSVFAASVLFMIKEELVKAFIVLTNKSKKVSSNLSS 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2499g00003 341 Gene3D Mitochondrial carrier domain 105 327 IPR023395 -
Vium2499g00003 341 ProSiteProfiles Solute carrier (Solcar) repeat profile. 4 101 IPR018108 -
Vium2499g00003 341 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 5 330 IPR044712 GO:0006862|GO:0055085
Vium2499g00003 341 ProSiteProfiles Solute carrier (Solcar) repeat profile. 236 324 IPR018108 -
Vium2499g00003 341 Pfam Mitochondrial carrier protein 4 100 IPR018108 -
Vium2499g00003 341 Pfam Mitochondrial carrier protein 259 325 IPR018108 -
Vium2499g00003 341 Pfam Mitochondrial carrier protein 119 243 IPR018108 -
Vium2499g00003 341 SUPERFAMILY Mitochondrial carrier 5 320 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2499g00003 Vium-Chr2499 37963 43374 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2499g00003 64 325 Chloroplast and Mitochondria Gene Families AT1G25380 23.711 8.52e-18 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2499g00003 K13354 - gmx:100775304 542.732