Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2493g00002 ATGAATATCCTGATTTGGGCATTTAAATTCTGTTTTTTAATTCAAAATTGTTTATCCAGCCGAATGCTTCTGCAGAAGAGAGTGTTCTTTCACTCACACAGAGTCCAGCCTATGGCACCAGAACAAGTGTTGTCAGACCGTGACAGTGAAGATGAAGTTGACGATGACATTGCAGATCTTGAAGATAGAAGGATGCTTGATGATTTTGTGGATGTTTCCAAAGATGAAAAACAACTCATGCATCTCTGGAACTCCTTTATGAGGAAGCAAAGGGTGCTGGCGGATGGTCATGTGCCGTGGGCCTGTGAGGCATTTTCCAAGCTTCATGGAAAAAAGCTGGTCACATCTCCAACTTTATTCTGGTGTTGGAGGTTGTTCATGATTAAACTTTGGAATCATGGTCTTCTTGATGCCTGCACAATGAACAACTGTAACAGAACATTAGATAGTTACAGAAACGAGGGATTGGGTACTAGCAAATAA 483 0.412 MNILIWAFKFCFLIQNCLSSRMLLQKRVFFHSHRVQPMAPEQVLSDRDSEDEVDDDIADLEDRRMLDDFVDVSKDEKQLMHLWNSFMRKQRVLADGHVPWACEAFSKLHGKKLVTSPTLFWCWRLFMIKLWNHGLLDACTMNNCNRTLDSYRNEGLGTSK 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2493g00002 160 CDD VEFS-box_EMF2-like 24 151 - -
Vium2493g00002 160 PANTHER POLYCOMB GROUP PROTEIN 20 154 - -
Vium2493g00002 160 Pfam VEFS-Box of polycomb protein 20 146 IPR019135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2493g00002 Vium-Chr2493 15 2375 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2493g00002 18 149 C2H2 Transcription Factor Family AT5G51230 79.545 1.54e-62 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2493g00002 - - vum:124830748 305.064