Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2476g00037 ATGTCATCTCAACTCTCCTCTCTCTTTCTGCCGCTATCTGCGTCCTCAACCATGCTCACTTTTGATCTTTTCATCGGTGTTATGTCACTTGTCGCCATTTTTGGCTACTGGTTGGTTCCTGGTGGTCTTGCTTGGGCTCTCTCCAAGTTCAGACAGGGAAATCCTCTCACCAACAAACCTGCCATTCCCGGACCTTCTGGTTTTCCGGTGGTGGGTCTTCTTTCTGCTTTCACAGGGCATCTTACTCACAGAGTCCTTGCCAAGCTTGCTCACACCTTTGATGCCAAGCCTTTGATGGCATTCTCGGTGGGCTTTACTCGTTTCATCATCTCTTCTCATCCTGACACGGCCAAAGGGATTTTGAGCAGTTCAGCTTTCGCCGACCGTCCTATCAAGGAGTCTGCTTACGAGCTCCTCTTCCACCGTGCAATGGGGTTTGCCCCGTACGGTGAGTACTGGAGGAACCTGAGGAGGATTTCCGCCACTCACATGTTCTCTCCAAAGAGAATCGCCGCCTCCGGCGAGTTCCGGGCTGAAGTTGGGGCCCAGATGGTGAAAGACATCATGGAGCTGATGAGGAGAGATGGTGAGGTAGAGGTGAGAAAGGTGTTGCATTTCGGGTCCTTGAATAACGTGATGATGAGCGTGTTTGGGAAGAGTTATGTGTTTGGTGAGGGTGGTGATGGGTGTGAGCTTGAGGAGTTGGTGAGTGAGGGGTATGAATTACTTGGGATGTTTAACTGGAGTGACCACTTTCCACTTTTGGGTAGGTTGGATTTGCAAGGTGTGAGGAAGAGGTGTAGGAGTTTGGTGGAGAGAGTGAATGCTTTTGTGGGAAAAATCATAGCGGAGCACAGGGAGAAGAGGGCTGCTGCAGGTGAGGATAAGGCGAAGGATAGTGAGAGCTCCGGCGACTTTGTCGACGTGCTTTTGGATTTGGAGAAAGAGAACAGGTTTCAACACTCTGATATGGTTGCTGTTTTGTGGGAAATGATCTTTAGGGGGACTGATACAGTGGCAATACTGGTAGAATGGATTCTTGCGAGGATGGTTGTACACTCTGAAATCCAAGCGAAGGCTCAAAGTGAAATAGACAGTGTTGTTGGGTGTGAGCGGAGTGTGAATGATGATGACCTTGGGAAGCTTCCTTACGTGAGGGCCATAGTGAAGGAAACTCTGAGGATGCACCCACCGGGTCCTCTTCTGTCATGGGCGAGGTATTCCATCCATGACACAGAAATTGGCAACCACTTTGTTCCAGCTGGAACCACAGCTATGGTTAACATGTGGGCCATCAGTCATGACAAAGAAGTGTGGTCTGAACCGGAAGAGTTCAAACCGGAGCGTTTTGTGACGGAGGAGGTGCAAATGATGGGGTCTGATCTGAGGTTGGCACCTTTCGGGTCTGGGAGAAGGGTTTGCCCTGGGAAAGCCATGGGTGTAGCGAGCGTTGAGCTTTGGGTTGCTATGTTGCTACAAAAGCTGAAATGGATGAGTTGTGATTGTGGTGTGGATCTGTCTGAATGCTTGGAACTGTCTATGAAAATGAAATGCTCTCTCATCACCAAAGTTGTTCCAAGACCTTCTGTAACCCATTCTCCTTGA 1605 0.496 MSSQLSSLFLPLSASSTMLTFDLFIGVMSLVAIFGYWLVPGGLAWALSKFRQGNPLTNKPAIPGPSGFPVVGLLSAFTGHLTHRVLAKLAHTFDAKPLMAFSVGFTRFIISSHPDTAKGILSSSAFADRPIKESAYELLFHRAMGFAPYGEYWRNLRRISATHMFSPKRIAASGEFRAEVGAQMVKDIMELMRRDGEVEVRKVLHFGSLNNVMMSVFGKSYVFGEGGDGCELEELVSEGYELLGMFNWSDHFPLLGRLDLQGVRKRCRSLVERVNAFVGKIIAEHREKRAAAGEDKAKDSESSGDFVDVLLDLEKENRFQHSDMVAVLWEMIFRGTDTVAILVEWILARMVVHSEIQAKAQSEIDSVVGCERSVNDDDLGKLPYVRAIVKETLRMHPPGPLLSWARYSIHDTEIGNHFVPAGTTAMVNMWAISHDKEVWSEPEEFKPERFVTEEVQMMGSDLRLAPFGSGRRVCPGKAMGVASVELWVAMLLQKLKWMSCDCGVDLSECLELSMKMKCSLITKVVPRPSVTHSP 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2476g00037 534 FunFam Cytochrome P450 78A5 55 527 - -
Vium2476g00037 534 Pfam Cytochrome P450 63 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2476g00037 534 PANTHER CYTOCHROME P450 78A7-RELATED 14 527 - -
Vium2476g00037 534 SUPERFAMILY Cytochrome P450 62 527 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2476g00037 534 PRINTS P450 superfamily signature 465 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2476g00037 534 PRINTS P450 superfamily signature 387 398 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2476g00037 534 PRINTS P450 superfamily signature 334 351 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2476g00037 534 Gene3D Cytochrome P450 49 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2476g00037 534 CDD CYP78 95 520 - -
Vium2476g00037 534 PRINTS E-class P450 group I signature 474 497 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2476g00037 534 PRINTS E-class P450 group I signature 343 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2476g00037 534 PRINTS E-class P450 group I signature 323 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2476g00037 534 PRINTS E-class P450 group I signature 386 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2476g00037 534 PRINTS E-class P450 group I signature 464 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2476g00037 534 PRINTS E-class P450 group I signature 428 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium2476g00037 534 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 467 476 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2476g00037 Vium-Chr2476 190254 192176 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2476g00037 9 527 Cytochrome P450 AT1G74110 63.653 0.0 673
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2476g00037 K20619 - gmx:100811042 839.721