Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2476g00021 ATGGCAGCAAAGTTCTTACATTCTTTAGCAGATGACAACCCAGATTTAAAAAAGCAGATAGGATGCATGACTGGGATTTTCCAACTCTTTGATCGTCATCACATTATTTCCTCTCCCCACATTACCCAGAAGAGGCATCATACAGGTTATTCCCTCTTCAATTATGACAGTCTGGAAACAGGTTCTAATATCATACACCAGCCGCAATCAACAGCTGATATGAGGGGTATGAGTGATAAGCACAAAATTTCAGCTGAATCATCGAGAACCTCATTCTGTTCCTCTTGTTCATCATCCATGTCCTCTTTGGACTATAAAGCTGAAGCAGATGCTCCCTTTGACCGGATTGGTTTTCCTGAAACTCCTATGAGGGACCCAGTCATGAACCAAGCAAGTACCTCTCCCCATTTAGGATGTCCATCCCTTGATCTGAGGGATGTGGTGAAGGAATGTATATATAGGGAAGCCAGAGGACTGTGCAGAGAAAGGGATTCCCCTAGACAATTTCAGATGTCTAAATCTGTTGATAGAAAGCAAACTCCTATTGATCTAAAGGAGTCCTTGCGAGTCCTTGCTATACTTAGAGAAACACCTCGGCATTATGTTGAAGCTAAAGAACTTCCTAGACTATCAAATGAAGTAAAAGATGGACATTGGCATTCCATTTCAAAGGATGCTCCTCGGTTTTCTTATGATGGAAGAACAACATGTGAGGTATCTTTTGACTCGCATGATACCTTGAAATGCCCACAAAAGCTAAAAGAGCTTCCTAGACTTTCACTGGACAGTAGGGAAGGTTCATGGCGCTCAAACGGCTCTGATTCAAAACTCAGTAACCTCTCAAGAAATTCCAATACAGGTGACGCCTCCACCTCAGTTGACAACATTTCTAGTCTACAACAGCGTTCAGCATCTCAGAGACGGTCACCTGGTATTGTAGCAAAGTTAATGGGCTTGGAAGCATTGCCAGAGTCCTATGTGGCTTGTGATACCAAGTCAAGTTTGAGTGAAACTGACTCAAGTAAAGGTAATAATCAGTTTGGGAAAAATGGATTCGTTACACCACTTCCAGTTTCTAATTTCCCTGAATTCCCATTGAAAGAGAAAGAGATGACTTCCCCACGGTGGAAGAATCCTGATTTGGTTGTCAAACCAATATTGAGTACAAGGTTTCCCATTGAACCTGCACCATGGAAGCAGCCGGATGGGAACCTAAGCTCTGAGAAACTAACTTCCAGGGTCATAAAACCTACAGCAAGAACCCCGGATTCATTTCCTTCAGTTTATAGTGAGATTGAGAATAGATTAAAGGATCTTGAATTTAAACAATCTGGAAGGGATCTCAGAGCACTCAAACGGATATTAGAAACAATGCAAGTAAAGGGTCTATTAGAGAGCAGAAAAGAAGAACAAGCTTCAAATGTTGTTAGAAATAAAAGAGACTATGAACTAAAATCGACCTCAATTCAGCATTCTACGAGGCAGGAAACAGCCTGGGAATCTGATTCTGCAGTGGCTATAGAGTCACCAATAGTGATCATGAAACCAGCAAAAAATGTTGAAAAAAGTGGACCTTTTGCTTCTTCAGTCTTTCCATTTCATGAACTTTCTGATTCCGACAAACTTCAGAGTGATGGTGTACATGTACATGGTAAAAAAGGCACACCTTCCAGTCAAATAGCCAAAGACCGGTCTCCTAGAACAAGTCCCAAGGATGCTTCTACCAGTTTTAGCGAAAAGAAAGTGAATAGTATCAAGACTAGAAAATCAACACAATCCCTACCAAGGTCTACACAATTTCCAAAAGAAAATGGTCCAAGCTCAGTAAAGAGTTCAGAATCTGCTAGCCCAAGAATGCAGCAGAAGAAGTCAGCATCGGAGAAGCAATCTTGCCTTCTTACCTCATCATCAGATTCAAATAATCCCAGAAGGCAGTTCTGTAAGCAGACAACACACTCAGGTTCTCCCAGTCAAAAACTGAGACCTAAAGTCCCTAATTCACAGAGCAGTGATGACAGACTCAGTGAGACTAGCAATGAACAAAGAAGTTTAAGTAGCCAGTGGGATGAAGTATCTCTGCAATCAGACAGTATCTCTTTCGACTCAAAGATGGATGCTGAAGTTGTTGATAGCCAATGCCCATCTAGGAAGGCTGTTGAGCATTTGGTTTCAGGATCCATGCATAAGAAATCAACTCCGAGGTGGGATGAGGATGAGTCAATTGCAGAACTTACAACACACGCCTCAGATCATCCAAGTCTCGGATCAGTTGTTGATGTCTCAGTATACAAATTCGGTATGCCATCCCCAGTAAAGAATATATCCTATTCTCGTAAAGATCAGTGGAGCCCTGCAGAAGGCCTCTTCCTTAACAATACAAGATATAGAGAGATCAACCACAAGAAATTGCAAAGCATAGGTCGCCTTATTGAAAAGCTTAGACAGCTAAACTCAAGTCACGATGAGACTAGAATCGATTACATAGCTTCCCTTTGTGAAAATACAAACTCAGACCACAGATACATTGCTGAGATACTATTGGCTTCAGGTCTACTTCTGAGAGCTTTGAGTTCTGAGCTGCTGACCTTTCAACATCACTCATCAGGTCATCCCATTAATCCTGAGTTATTCCTTGTGTTGGAACAAACCAAGTTAAGTAGTTTGCTTTCGAAAGAAGGGGGCAGCGATGGAAAAATTGCTTACAGGAAGCCAAATACGGAGAAGTGGCACAGGAAACTCATCTTTGATACTGTGAATGAGATTCTTCGTACAAAGCTAGGCTCTTCTCGTGAGCCATGGTTCAAGCCGGATGGACTTACAAGGAAATTCGTCACTGCACAGAAGCTTCTTAAAGAACTATGCTTTGAGATACAAAAACTTAAATATGTGAAACCAGATAGCAAAGATGAAGGGGATGATCTGAAAAGTATGCTAGGGGAAGATGTGATGCGTCACTCGGAAAATTGGACAGGTTTCCCTGGTGAATTACCCGGGGTTGTGTTGGATGTTGAGAGACAGATATTTAAGGACTTAATTGATGAATTTGTGATTGATGAAAGTTTGGGAGTGACGTACAATAGGCACAGCAAGCTATTTGGAAAGTAG 3105 0.4167 MAAKFLHSLADDNPDLKKQIGCMTGIFQLFDRHHIISSPHITQKRHHTGYSLFNYDSLETGSNIIHQPQSTADMRGMSDKHKISAESSRTSFCSSCSSSMSSLDYKAEADAPFDRIGFPETPMRDPVMNQASTSPHLGCPSLDLRDVVKECIYREARGLCRERDSPRQFQMSKSVDRKQTPIDLKESLRVLAILRETPRHYVEAKELPRLSNEVKDGHWHSISKDAPRFSYDGRTTCEVSFDSHDTLKCPQKLKELPRLSLDSREGSWRSNGSDSKLSNLSRNSNTGDASTSVDNISSLQQRSASQRRSPGIVAKLMGLEALPESYVACDTKSSLSETDSSKGNNQFGKNGFVTPLPVSNFPEFPLKEKEMTSPRWKNPDLVVKPILSTRFPIEPAPWKQPDGNLSSEKLTSRVIKPTARTPDSFPSVYSEIENRLKDLEFKQSGRDLRALKRILETMQVKGLLESRKEEQASNVVRNKRDYELKSTSIQHSTRQETAWESDSAVAIESPIVIMKPAKNVEKSGPFASSVFPFHELSDSDKLQSDGVHVHGKKGTPSSQIAKDRSPRTSPKDASTSFSEKKVNSIKTRKSTQSLPRSTQFPKENGPSSVKSSESASPRMQQKKSASEKQSCLLTSSSDSNNPRRQFCKQTTHSGSPSQKLRPKVPNSQSSDDRLSETSNEQRSLSSQWDEVSLQSDSISFDSKMDAEVVDSQCPSRKAVEHLVSGSMHKKSTPRWDEDESIAELTTHASDHPSLGSVVDVSVYKFGMPSPVKNISYSRKDQWSPAEGLFLNNTRYREINHKKLQSIGRLIEKLRQLNSSHDETRIDYIASLCENTNSDHRYIAEILLASGLLLRALSSELLTFQHHSSGHPINPELFLVLEQTKLSSLLSKEGGSDGKIAYRKPNTEKWHRKLIFDTVNEILRTKLGSSREPWFKPDGLTRKFVTAQKLLKELCFEIQKLKYVKPDSKDEGDDLKSMLGEDVMRHSENWTGFPGELPGVVLDVERQIFKDLIDEFVIDESLGVTYNRHSKLFGK 1034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2476g00021 1034 MobiDBLite consensus disorder prediction 260 308 - -
Vium2476g00021 1034 MobiDBLite consensus disorder prediction 558 691 - -
Vium2476g00021 1034 PANTHER LONGIFOLIA PROTEIN 1 1022 IPR033334 GO:0051513
Vium2476g00021 1034 MobiDBLite consensus disorder prediction 543 691 - -
Vium2476g00021 1034 MobiDBLite consensus disorder prediction 264 308 - -
Vium2476g00021 1034 Pfam Domain of unknown function (DUF4378) 838 1014 IPR025486 -
Vium2476g00021 1034 Pfam DUF761-associated sequence motif 300 327 IPR032795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2476g00021 Vium-Chr2476 124663 129425 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2476g00021 128 1033 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 43.021 3.99e-179 543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2476g00021 - - vum:124830690 2004.18