Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2476g00020 ATGGCAGCAAAGTTCTTACATTCTTTAGCAGATGACAACCCAGATTTAAAAAAGCAGATAGGATGCATGACTGGGATTTTCCAACTCTTTGATCGTCATCACATTATTTCCTCTCCCCACATTACCCAGAAGAGGCATCATACAGGTTATTCCCTCTTCAATTATGACAGTCTGGAAACAGGTTCTAATATCATACACCAGCCGCAATCAACAGCTGATATGAGGGGTATGAGTGATAAGCACAAAATTTCAGCTGAATCATCGAGAACCTCATTCTGTTCCTCTTGTTCATCATCCATGTCCTCTTTGGACTATAAAGCTGAAGCAGATGCTCCCTTTGACCGGATTGGTTTTCCTGAAACTCCTATGAGGGACCCAGTCATGAACCAAGCAAGTACCTCTCCCCATTTAGGATGTCCATCCCTTGATCTGAGGGATGTGGTGAAGGAATGTATATATAGGGAAGCCAGAGGACTGTGCAGAGAAAGGGATTCCCCTAGACAATTTCAGATGTCTAAATCTGTTGATAGAAAGCAAACTCCTATTGATCTAAAGGAGTCCTTGCGAGTCCTTGCTATACTTAGAGAAACACCTCGGCATTATGTTGAAGCTAAAGAACTTCCTAGACTATCAAATGAAGTAAAAGATGGACATTGGCATTCCATTTCAAAGGATGCTCCTCGGTTTTCTTATGATGGAAGAACAACATGTGAGGTATCTTTTGACTCGCATGATACCTTGAAATGCCCACAAAAGCTAAAAGAGCTTCCTAGACTTTCACTGGACAGTAGGGAAGGTTCATGGCGCTCAAACGGCTCTGATTCAAAACTCAGTAACCTCTCAAGAAATTCCAATACAGGTGACGCCTCCACCTCAGTTGACAACATTTCTAGTCTACAACAGCGTTCAGCATCTCAGAGACGGTCACCTGGTATTGTAGCAAAGTTAATGGGCTTGGAAGCATTGCCAGAGTCCTATGTGGCTTGTGATACCAAGTCAAGTTTGAGTGAAACTGACTCAAGTAAAGGTAATAATCAGTTTGGGAAAAATGGATTCGTTACACCACTTCCAGTTTCTAATTTCCCTGAATTCCCATTGAAAGAGAAAGAGATGACTTCCCCACGGTGGAAGAATCCTGATTTGGTTGTCAAACCAATATTGAGTACAAGGTTTCCCATTGAACCTGCACCATGGAAGCAGCCGGATGGGAACCTAAGCTCTGAGAAACTAACTTCCAGGGTCATAAAACCTACAGCAAGAACCCCGGATTCATTTCCTTCAGTTTATAGTGAGATTGAGAATAGATTAAAGGATCTTGAATTTAAACAATCTGGAAGGGATCTCAGAGCACTCAAACGGATATTAGAAACAATGCAAGTAAAGGGTCTATTAGAGAGCAGAAAAGAAGAACAAGCTTCAAATGTTGTTAGAAATAAAAGAGACTATGAACTAAAATCGACCTCAATTCAGCATTCTACGAGGCAGGAAACAGCCTGGGAATCTGATTCTGCAGTGGCTATAGAGTCACCAATAGTGATCATGAAACCAGCAAAAAATGTTGAAAAAAGTGGACCTTTTGCTTCTTCAGTCTTTCCATTTCATGAACTTTCTGATTCCGACAAACTTCAGAGTGATGGTGTACATGTACATGGTAAAAAAGGCACACCTTCCAGTCAAATAGCCAAAGACCGGTCTCCTAGAACAAGTCCCAAGGATGCTTCTACCAGTTTTAGCGAAAAGAAAGTGAATAGTATCAAGACTAGAAAATCAACACAATCCCTACCAAGGTCTACACAATTTCCAAAAGAAAATGGTCCAAGCTCAGTAAAGAGTTCAGAATCTGCTAGCCCAAGAATGCAGCAGAAGAAGTCAGCATCGGAGAAGCAATCTTGCCTTCTTACCTCATCATCAGATTCAAATAATCCCAGAAGGCAGTTCTGTAAGCAGACAACACACTCAGGTTCTCCCAGTCAAAAACTGAGACCTAAAGTCCCTAATTCACAGAGCAGTGATGACAGACTCAGTGAGACTAGCAATGAACAAAGAAGTTTAAGTAGCCAGTGGGATGAAGTATCTCTGCAATCAGACAGTATCTCTTTCGACTCAAAGATGGATGCTGAAGTTGTTGATAGCCAATGCCCATCTAGGAAGGCTGTTGAGCATTTGGTTTCAGGATCCATGCATAAGAAATCAACTCCGAGGTGGGATGAGGATGAGTCAATTGCAGAACTTACAACACACGCCTCAGATCATCCAAGTCTCGGATCAGTTGTTGATGTCTCAGTATACAAATTCGGTATGCCATCCCCAGTAAAGAATATATCCTATTCTCGTAAAGTTGAAAACGCTCAAGAATCTAAAGAAAATTATCATACAGATCAGTGGAGCCCTGCAGAAGGCCTCTTCCTTAACAATACAAGATATAGAGAGATCAACCACAAGAAATTGCAAAGCATAGGTCGCCTTATTGAAAAGCTTAGACAGCTAAACTCAAGTCACGATGAGACTAGAATCGATTACATAGCTTCCCTTTGTGAAAATACAAACTCAGACCACAGATACATTGCTGAGATACTATTGGCTTCAGGTCTACTTCTGAGAGCTTTGAGTTCTGAGCTGCTGACCTTTCAACATCACTCATCAGGTCATCCCATTAATCCTGAGTTATTCCTTGTGTTGGAACAAACCAAGTTAAGTAGTTTGCTTTCGAAAGAAGGGGGCAGCGATGGAAAAATTGCTTACAGGAAGCCAAATACGGAGAAGTGGCACAGGAAACTCATCTTTGATACTGTGAATGAGATTCTTCGTACAAAGCTAGGCTCTTCTCGTGAGCCATGGTTCAAGCCGGATGGACTTACAAGGAAATTCGTCACTGCACAGAAGCTTCTTAAAGAACTATGCTTTGAGATACAAAAACTTAAATATGTGAAACCAGATAGCAAAGATGAAGGGGATGATCTGAAAAGTATGCTAGGGGAAGATGTGATGCGTCACTCGGAAAATTGGACAGGTTTCCCTGGTGAATTACCCGGGGTTGTGTTGGATGTTGAGAGACAGATATTTAAGGACTTAATTGATGAATTTGTGATTGATGAAAGTTTGGGAGTGACGTACAATAGGCACAGCAAGCTATTTGGAAAGTAG 3144 0.4151 MAAKFLHSLADDNPDLKKQIGCMTGIFQLFDRHHIISSPHITQKRHHTGYSLFNYDSLETGSNIIHQPQSTADMRGMSDKHKISAESSRTSFCSSCSSSMSSLDYKAEADAPFDRIGFPETPMRDPVMNQASTSPHLGCPSLDLRDVVKECIYREARGLCRERDSPRQFQMSKSVDRKQTPIDLKESLRVLAILRETPRHYVEAKELPRLSNEVKDGHWHSISKDAPRFSYDGRTTCEVSFDSHDTLKCPQKLKELPRLSLDSREGSWRSNGSDSKLSNLSRNSNTGDASTSVDNISSLQQRSASQRRSPGIVAKLMGLEALPESYVACDTKSSLSETDSSKGNNQFGKNGFVTPLPVSNFPEFPLKEKEMTSPRWKNPDLVVKPILSTRFPIEPAPWKQPDGNLSSEKLTSRVIKPTARTPDSFPSVYSEIENRLKDLEFKQSGRDLRALKRILETMQVKGLLESRKEEQASNVVRNKRDYELKSTSIQHSTRQETAWESDSAVAIESPIVIMKPAKNVEKSGPFASSVFPFHELSDSDKLQSDGVHVHGKKGTPSSQIAKDRSPRTSPKDASTSFSEKKVNSIKTRKSTQSLPRSTQFPKENGPSSVKSSESASPRMQQKKSASEKQSCLLTSSSDSNNPRRQFCKQTTHSGSPSQKLRPKVPNSQSSDDRLSETSNEQRSLSSQWDEVSLQSDSISFDSKMDAEVVDSQCPSRKAVEHLVSGSMHKKSTPRWDEDESIAELTTHASDHPSLGSVVDVSVYKFGMPSPVKNISYSRKVENAQESKENYHTDQWSPAEGLFLNNTRYREINHKKLQSIGRLIEKLRQLNSSHDETRIDYIASLCENTNSDHRYIAEILLASGLLLRALSSELLTFQHHSSGHPINPELFLVLEQTKLSSLLSKEGGSDGKIAYRKPNTEKWHRKLIFDTVNEILRTKLGSSREPWFKPDGLTRKFVTAQKLLKELCFEIQKLKYVKPDSKDEGDDLKSMLGEDVMRHSENWTGFPGELPGVVLDVERQIFKDLIDEFVIDESLGVTYNRHSKLFGK 1047
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2476g00020 1047 PANTHER LONGIFOLIA PROTEIN 1 1035 IPR033334 GO:0051513
Vium2476g00020 1047 MobiDBLite consensus disorder prediction 260 308 - -
Vium2476g00020 1047 Pfam DUF761-associated sequence motif 300 327 IPR032795 -
Vium2476g00020 1047 Pfam Domain of unknown function (DUF4378) 851 1027 IPR025486 -
Vium2476g00020 1047 MobiDBLite consensus disorder prediction 558 692 - -
Vium2476g00020 1047 MobiDBLite consensus disorder prediction 543 692 - -
Vium2476g00020 1047 MobiDBLite consensus disorder prediction 264 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2476g00020 Vium-Chr2476 124663 130085 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2476g00020 128 1046 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 42.872 2.31e-179 544
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2476g00020 - - vum:124830690 2040