Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2436g00013 ATGGAGCCGGGGACTAGAAGATCACCTCAAGATATGGTAGAAAGGACTTCTGATCATTATTTTAGCAAAAACAACAACGGAAAGAAATCAGTTGTAAAAAAGAGAAAGGTCTGTGGCGTGGATGAGACAGGAAAAGAGATTAATTCAGATGCTTTAAAAGGAAGTTATGCTAATGATATTACTGTGAGAACTAGTGACAATGAAATTGTGATCGAAATGAAGTGCCCCGCAAGAGCAGGAAAGCTACTAGAAATTATGGAAGCAGTTAATAGTCTCAGTATAGATTTTAATTCGGTTCAGTCAACAGAGGCTGATGGAAATCTTTATCTGACCATTAAATCTGTGCTCACAGGAGCAACTATTGCAACAACCAAAAGAATCAAACAAGCACTTCAAAAAGTGGCTTCGAAGTTCTGA 417 0.3789 MEPGTRRSPQDMVERTSDHYFSKNNNGKKSVVKKRKVCGVDETGKEINSDALKGSYANDITVRTSDNEIVIEMKCPARAGKLLEIMEAVNSLSIDFNSVQSTEADGNLYLTIKSVLTGATIATTKRIKQALQKVASKF 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2436g00013 138 PANTHER TRANSCRIPTION FACTOR TT8 12 136 - -
Vium2436g00013 138 MobiDBLite consensus disorder prediction 1 22 - -
Vium2436g00013 138 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2436g00013 Vium-Chr2436 86702 87802 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2436g00013 6 135 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G41315 37.405 5.44e-18 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2436g00013 - - vum:124830563 252.677