Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2436g00010 ATGGCGAAAAGATCTCCTACTCGGGTTAACCAAACGTACGAGACAGGTTGTACGTGGCGAATGTTTAGAATCTTTAATTTTCGTGAAAGTCGTTCCGACAGAAGATTGCATTTGAATGCTCATGCTAATGCCGCAGAAAATGGAAAATCCAGAAGTAACTCAGGTGCGGCCAGCACAGTTGATGAGAAGTGCCTTCAAATTGGTGTGAGTCCCAGAAGAAGAGATTACATCTGTAGAAGTATCAACAGCATGGTGAATGATCAGGTAGAAGATTGGGAAAATGAAGTAAAAAAGATGATTGTTGATCACAGATTTGTCAATACACATTATCAAGGCAAAGATGGAGCAGGCTGCCAGCCTAATCAAATCCTGGATGCTTTACAGATTTTATATACAAACAAGGAACTTTTCATTAAACTTCTGCAAGATCCAAACTCTTTGTTAGTAAAACAGATTCAGGAATTACAGAGTTCTCAAGTGAAAGAACCATGCCAGCATGCAAGGCAGAAAATGATGAGTAGATTAAATAAGCCTCAAAATACTGATGCTACACAATGTGCAAAACCTTTTAGTTCCTCTGATAGATCTGATTTGAGGTCAAACAGAATAGTAGTTTTGAAGCCTGGCACTGTTAATGTGGAAAATTCTGAAGAAACAAGCTTTGTTAGCCCTCCACATTCGCCTAATAGCTTCAGTTCTAATGCACAAAATACTAGGCTTTCACATTTTCCCTTCAGTTGTATAAAGAGAAAATTGAAGCATGTTATGAAAGTAAGGAGACAAGAACAGCAGTTGAAGACAGCTGATGGAATACCAACTAGACTTTCCTCCAGTTCAAAGGGCCTGGGAGATGGAAAAAAAGTAAAAGAATTGGAAATTTCTGAAAGAAACTCACCAATTCATGCCCTTAGTAATACTGGAAAATGGTTGAATTCATATCATGATTTGAAGAAGAATAGGGAGAACATTATCATTTTCAAGGATTCTTCGTTATCTATGGGGCAGGAAGCAGCTTCTTTTGGTGAAAGTTGCAGTAAGAATACTTCAGTTAGCCCTCGTGAAGAAAATATATTGAAAATGCACGTTGAAAGTAGGAAGAGTCGGTCTCAGATGTTGAACTGTGGAATTGAGGAAAATTTTGAAGAAGACATTAATCTTAAAAATAGTGTTCTTAGCCACAATCTCCATGCATATTATGATATTCCCAAAGATGGCAGATACATGGACAGTCCTACTCAGATCATCGACATGAATAATATAATCAGAGGAAGTGGATCCTTTCTGGATTTGCGTCCAGATATCCAGACGTTGTCTTTTTCATCAGATGTTTCATCAAGCCAATCCTGTCAGAGAACAGATAATATTGTAAACATGGGAAACAAAGTTGAACATCCTAATAATGAATCTTTTGATGAACATTTTATTAAGGATGATGTTACCATACTTCCAATCACAATCATTCAACCAGATGAGTCACCAGAAAAGAGAATGCATGAAAAAATTGAAGAGAACCATTTTGAAGACCTTTTAAGACTCTCTTTTGATTCAATGAACGATTTAGTCTCCTCCAAGGACGACATCATAGACTATGTAAGGGAAATTCTGCATGCTTTCAACCTTACTCTGAAGAGATCATCTGACCAATTGCTGGATCCATCCACCTTTGAACTGAAGGAAAAACCTAGCCTACTTTCTGGTGGAACAATCTTGCATGACTGTGTCATAGAATGTTTCATGCAGGTATACCAGAATAGTGGTTTCCCACTTCACGTTGGAAACGTCCAAGCGTATGTTTTGAAGAAACTTGTGGTTAAAGAGATCACTGGACTCGTTAACTTGCACTGTCACTCTCATCCATCAACTTTAACGTTAGAACAGCTTGTTGAAAAGGACTTGGCAAGACGTGGTTCGTGGCTAAATATCCAATTTGATTCAGAAGATATTGCAGTAGAGCTGGAGAAACATGTTCTTGAAAAACTGGTATTGGAAATTGCGTCTGAGATGAATTACCAGAAACATGACACATTGCATTAA 2034 0.3791 MAKRSPTRVNQTYETGCTWRMFRIFNFRESRSDRRLHLNAHANAAENGKSRSNSGAASTVDEKCLQIGVSPRRRDYICRSINSMVNDQVEDWENEVKKMIVDHRFVNTHYQGKDGAGCQPNQILDALQILYTNKELFIKLLQDPNSLLVKQIQELQSSQVKEPCQHARQKMMSRLNKPQNTDATQCAKPFSSSDRSDLRSNRIVVLKPGTVNVENSEETSFVSPPHSPNSFSSNAQNTRLSHFPFSCIKRKLKHVMKVRRQEQQLKTADGIPTRLSSSSKGLGDGKKVKELEISERNSPIHALSNTGKWLNSYHDLKKNRENIIIFKDSSLSMGQEAASFGESCSKNTSVSPREENILKMHVESRKSRSQMLNCGIEENFEEDINLKNSVLSHNLHAYYDIPKDGRYMDSPTQIIDMNNIIRGSGSFLDLRPDIQTLSFSSDVSSSQSCQRTDNIVNMGNKVEHPNNESFDEHFIKDDVTILPITIIQPDESPEKRMHEKIEENHFEDLLRLSFDSMNDLVSSKDDIIDYVREILHAFNLTLKRSSDQLLDPSTFELKEKPSLLSGGTILHDCVIECFMQVYQNSGFPLHVGNVQAYVLKKLVVKEITGLVNLHCHSHPSTLTLEQLVEKDLARRGSWLNIQFDSEDIAVELEKHVLEKLVLEIASEMNYQKHDTLH 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2436g00010 677 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 1 68 - -
Vium2436g00010 677 Pfam Domain of unknown function (DUF4378) 529 663 IPR025486 -
Vium2436g00010 677 Pfam Protein of unknown function (DUF3741) 103 146 IPR022212 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2436g00010 Vium-Chr2436 66941 71538 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2436g00010 483 651 TRM (TON1 Recruiting Motif) Superfamily AT4G00440 28.042 2.88e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2436g00010 - - vra:106768413 1212.98