Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2433g00006 ATGGCTTCGATTTCCACAACTTTGCCTCTGCTTCTCTCGCTTCTTCTGTTACTCGGTCGCTACCATGCGGCTCAGGTGCCACAACCAGAGAGGGGAACCTACATTGTACACGTGGCAAAATCGGAAATGCCCCAAAGCTTTGAACACCATACGGTGTGGTATGAGTCCTCGCTCAAATCCGTCTCTGACTCGGCGAAAATCATTTACACCTACGATAACGCCATCCACGGATATGCGACTAGATTAACTGCGGAGGAAGCGCGTTTGCTGGAAAGCCAAACTGGGATTCTGGCGGTGTTGCCGGAGACGAGGTATGAACTTCACACGACGAGGACGCCGCAGTTCCTGGGTCTTGACAAGAGCGCGGACATGTTCCCCGAGTCGAGCTCCGCGAGTGACGTCATCGTCGGAGTCCTGGACACTGGCGTTTGGCCCGAGAGCAAGAGCTTCGACGACACGGGGCTTGGACCTGTTCCTAGTAGCTGGAAAGGCGAGTGTGAAACAGGAACGAACTTCAGTGCTTCCAACTGCAACAGAAAGTTGATCGGAGCCAGGTTCTTTGCGAAGGGTTGCGAGGCCATGTTGGGTCCTATTAACGAGACTGAGGAGTCTAGATCCCCTCGCGACGATGACGGTCACGGCACCCACACAGCCAGCACAGCCGCGGGATCTGTGGTTTCCGGCGCAAGTCTTTTCGGTTACGCATCCGGGACGGCGCGTGGGATGGCGACGCGCGCGAGAGTCGCTGCTTACAAGGTTTGCTGGAAGGGAGGGTGTTTCAGTTCGGATATTCTTGCGGCAATTGAGAGCGCGATACAAGACAACGTTAATGTGTTGTCGTTGTCGCTTGGTGGTGGAATGGCTGATTATTACAGAGACAGTGTCGCTATTGGAGCTTTTTCCGCGATGGAGAAAGGGATTTTAGTTTCTTGCTCCGCTGGGAACGCGGGTCCTAGTCCTTACAGTCTCTCAAACGTGGCACCATGGATAACGACCGTGGGTGCCGGTACTCTGGATCGTGACTTCCCTGCTTATGTTGCTCTAGGGAATGGACTTAACTTCTCCGGCGTGTCGCTATACCGAGGTAACGCTTTACCTGATTCACCGTTACCGTTTGTTTACGCAGGCAATGCCAGCAACGCTACGAACGGGAACTTGTGCGTGACGGGAACCTTGTCGCCCGAGAAAGTAGCCGGAAAGATTGTGTTATGTGATCGTGGATTAACTGCTAGGGTACAGAAAGGTTCAGTTGTGAAATCCGCCGGTGCTTTGGGCATGGTGTTGAGCAACACCGCCGCCAACGGCGAGGAGTTGGTGGCTGATGCTCATCTGTTGCCGGCGTCGGCGGTGGGGGAGAAAGCAGGCGACGCCATCAAGAAGTATTTGTTTTCCGAGGCTAAACCGACGGTGAGTATTTTGTTCGAGGGAACGAAGGTGGGGATTCAGCCATCACCTGTGGTTGCGGCGTTTAGCTCAAGAGGTCCCAACTCGATCACGCCTCAGATCCTGAAACCAGATCTGATGGCGCCAGGTGTCAACATCTTGGCGGGGTGGTCAAAGGCCGTGGGTCCCACAGGTTTGCCCGTTGATAACAGGCGCGTGGATTTCAATATCATCTCTGGGACCTCGATGTCTTGTCCTCACGTGAGCGGATTAGCCGCTTTGATAAAATCGGTTCACCCAGAGTGGAGCCCAGCCGCGGTTCGATCGGCTCTCATGACAACGGCTTACACCGTTTACAAAACCGGTGAGAAGTTGCAAGACAGTGCAACGGGAAAACCCTCCACGCCGTTTGATCACGGAGCGGGACACGTGGACCCTGTGGCTGCGCTCAATCCAGGGCTGGTGTATGATCTAACAGTGGATGATTATCTTGGTTTTCTCTGCGCGTTAAACTACTCTGCCTCAGAAATCAACACCCTGGCGAAGAGAAAATTCGAGTGCGACGCGGGCAAACAGTACAGTGTGAACAACCTGAACTACCCGTCGTTCGCGGTGTTGTTTGAATCCGGGAGTGGGTCCGGCGTGGTGAAGCACAGTCGAACCGTCACTAACGTGGGGCCCGCGGGAACGTACAAGGCTACGGTGACGTCAGACGCGGCCTCAGTGAAAATCTCGGTTGAACCGGAAGTGCTGAGTTTGAAAGAGAACGAGAAAAAATCGTTCGTGGTAAGTTTTTCATCCTCGGGTTCCACACAAGACAGAGTGAATGCGTTTGGACGGTTGGAATGGTCTGATGGGAAGCACGTGGTTGGGACCCCAATCTCAATAAACTGGGGTTGA 2283 0.5401 MASISTTLPLLLSLLLLLGRYHAAQVPQPERGTYIVHVAKSEMPQSFEHHTVWYESSLKSVSDSAKIIYTYDNAIHGYATRLTAEEARLLESQTGILAVLPETRYELHTTRTPQFLGLDKSADMFPESSSASDVIVGVLDTGVWPESKSFDDTGLGPVPSSWKGECETGTNFSASNCNRKLIGARFFAKGCEAMLGPINETEESRSPRDDDGHGTHTASTAAGSVVSGASLFGYASGTARGMATRARVAAYKVCWKGGCFSSDILAAIESAIQDNVNVLSLSLGGGMADYYRDSVAIGAFSAMEKGILVSCSAGNAGPSPYSLSNVAPWITTVGAGTLDRDFPAYVALGNGLNFSGVSLYRGNALPDSPLPFVYAGNASNATNGNLCVTGTLSPEKVAGKIVLCDRGLTARVQKGSVVKSAGALGMVLSNTAANGEELVADAHLLPASAVGEKAGDAIKKYLFSEAKPTVSILFEGTKVGIQPSPVVAAFSSRGPNSITPQILKPDLMAPGVNILAGWSKAVGPTGLPVDNRRVDFNIISGTSMSCPHVSGLAALIKSVHPEWSPAAVRSALMTTAYTVYKTGEKLQDSATGKPSTPFDHGAGHVDPVAALNPGLVYDLTVDDYLGFLCALNYSASEINTLAKRKFECDAGKQYSVNNLNYPSFAVLFESGSGSGVVKHSRTVTNVGPAGTYKATVTSDAASVKISVEPEVLSLKENEKKSFVVSFSSSGSTQDRVNAFGRLEWSDGKHVVGTPISINWG 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2433g00006 760 FunFam subtilisin-like protease SBT1.5 339 479 - -
Vium2433g00006 760 Gene3D - 339 480 - -
Vium2433g00006 760 SUPERFAMILY Subtilisin-like 107 615 IPR036852 GO:0004252|GO:0006508
Vium2433g00006 760 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 34 756 IPR045051 -
Vium2433g00006 760 FunFam Subtilisin-like protease SBT1.5 133 352 - -
Vium2433g00006 760 FunFam Subtilisin-like protease SBT1.9 23 108 - -
Vium2433g00006 760 CDD Peptidases_S8_3 105 577 IPR034197 -
Vium2433g00006 760 MobiDBLite consensus disorder prediction 198 220 - -
Vium2433g00006 760 Pfam Fibronectin type-III domain 658 757 IPR041469 -
Vium2433g00006 760 ProSiteProfiles Serine proteases, subtilase domain profile. 104 611 - -
Vium2433g00006 760 Gene3D - 628 759 - -
Vium2433g00006 760 Pfam Subtilase family 132 587 IPR000209 GO:0006508|GO:0008236
Vium2433g00006 760 Gene3D Peptidase S8/S53 domain 133 624 IPR036852 GO:0004252|GO:0006508
Vium2433g00006 760 CDD PA_subtilisin_like 345 472 - -
Vium2433g00006 760 ProSitePatterns Serine proteases, subtilase family, serine active site. 541 551 IPR023828 -
Vium2433g00006 760 PRINTS Subtilisin serine protease family (S8) signature 209 222 IPR015500 -
Vium2433g00006 760 PRINTS Subtilisin serine protease family (S8) signature 540 556 IPR015500 -
Vium2433g00006 760 PRINTS Subtilisin serine protease family (S8) signature 131 150 IPR015500 -
Vium2433g00006 760 Pfam Peptidase inhibitor I9 33 108 IPR010259 -
Vium2433g00006 760 Pfam PA domain 385 458 IPR003137 -
Vium2433g00006 760 SUPERFAMILY PA domain 392 459 IPR046450 -
Vium2433g00006 760 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 108 IPR037045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2433g00006 Vium-Chr2433 76127 78857 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2433g00006 14 759 Subtilisin-like Serine Gene Family AT5G67360 72.326 0.0 1124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2433g00006 - - gmx:100815413 1333.16