Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2432g00001 ATGGCTAGTTTGGTGCAAAAACCGTCCAATGATTATAGGCCTAGGGAGCTTTTCCTGAGCCTTCTGAAGTGTTTGCTGTCTGCGTCTGAATATAATGATTTTTTCAAGAAAACAACGGTTGGAGGTGAAGAATTGAGTGAGGAAGAACTGAAGAAGAGGGTAGCAGAAGTGTTGAAGGGAAAGAAGTACCTGGTAGTGCTTGACGACATATGGGAAACCCAACAATGGGACAAGGTCAAAGGTGCTTTCCCAGATCACCAAACAGGTAGCAGAATACTAATAACAAGTCGTGACAAGGAGGTGGCACACTATACAGGAACAACTTCCCCCTACTACCTTCCCCTCCTCGATAAACACGAGAGTTGGGAACTCTTCTCGAAGAAAGTGTTTCGAGGTGAGGAGTGCCCTTCTAATCTAGAGCCTCTGGGTAGATCCATTGTTGAGAATTGTGGGGGTTTACCACTTGCCATAGTTGTTTTGGCAGGACTTGTTGCCAGGAAGGAG 504 0.4583 MASLVQKPSNDYRPRELFLSLLKCLLSASEYNDFFKKTTVGGEELSEEELKKRVAEVLKGKKYLVVLDDIWETQQWDKVKGAFPDHQTGSRILITSRDKEVAHYTGTTSPYYLPLLDKHESWELFSKKVFRGEECPSNLEPLGRSIVENCGGLPLAIVVLAGLVARKE 168
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vium2432g00001 168 PRINTS Disease resistance protein signature 150 164 - -
Vium2432g00001 168 PRINTS Disease resistance protein signature 57 71 - -
Vium2432g00001 168 Gene3D - 115 168 IPR042197 -
Vium2432g00001 168 PANTHER DISEASE RESISTANCE PROTEIN RP 48 167 IPR044974 GO:0006952
Vium2432g00001 168 Pfam NB-ARC domain 42 167 IPR002182 GO:0043531
Vium2432g00001 168 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 166 IPR027417 -
Vium2432g00001 168 Gene3D - 2 109 IPR027417 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vium2432g00001 Vium-Chr2432 34054 34647 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2432g00001 58 157 WRKY Transcription Factor Family AT5G45050 30.000 3.56e-06 44.3
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2432g00001 - - vum:124830543 323.553