Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2424g00005 ATGGCTGCATACAGAGAACCCATGAACGTTGGTGACAGAGCCCCGGTTTCTCCGCAGCAACCGCACTCGCCGTGGCATTCTCCTGTTCCCTACCTATTTGGGGGGCTAGCGGCGATGCTGGGTCTCATAGCCTTCGCTCTGTTGATCCTTGCATGCTCCTACTGGAAGCTCTCCGGGTACCTTGAAGGGAACGGGGAAACAGAACGGGACCTGGAAGCTGGCGAGGGAAAAGCGGAGCAAGACCAGAAACCTCAGAGACCGTACGAGGAGAAGATCCTGGTGATCATGGCCGGCCAAGAGAAACCGACATTCTTGGCCACTCCGAGCGTCTCTTCTTCTTCAAGCTGCGGCACTAGCAGGTCCTCTTCCTTCGGCGACAACACAAGCACCTGCACCTGCGAAGAGACCCGAAAATCGCTGGAAGTGTCACAGTCCGTCAAAGAGGGAAGTACAGAGAGCGGGACCACCGAAACCTCGTCGGATCAGAACCCTTGA 495 0.5677 MAAYREPMNVGDRAPVSPQQPHSPWHSPVPYLFGGLAAMLGLIAFALLILACSYWKLSGYLEGNGETERDLEAGEGKAEQDQKPQRPYEEKILVIMAGQEKPTFLATPSVSSSSSCGTSRSSSFGDNTSTCTCEETRKSLEVSQSVKEGSTESGTTETSSDQNP 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2424g00005 164 MobiDBLite consensus disorder prediction 1 23 - -
Vium2424g00005 164 PANTHER PROTEIN GLUTAMINE DUMPER 4-RELATED 5 150 IPR040359 GO:0080143
Vium2424g00005 164 MobiDBLite consensus disorder prediction 69 88 - -
Vium2424g00005 164 MobiDBLite consensus disorder prediction 105 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2424g00005 Vium-Chr2424 52877 53708 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2424g00005 21 114 Glutamine Dumper (GDU) Family AT5G57685 68.750 1.20e-41 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2424g00005 - - gmx:100806224 225.328