Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2408g00002 ATGGCATATGCTGTCTCAAGGAACACAGCCAAAAATGCCCCATTACTACCTCAAGGAGAGGATCCTTACATAAAGAAGCTATATGTGAAGGGCAAAAATTACGATCTCTATGTTCACAGTTACTTGCGCTATGGTACAGAAGCATTTCGTGCAGAGGTTTTGGAGGTCACTGATGGCTCTGCTAACCCTTGCATTTTGGCTGGATACGAAGGAAGCTATACATATTCAGGAGTGGAGTATGCAGTGTACCCTCCAAAGTCAGGGCCCAATTATGATGCATGCAGAGAGATAGTCCTTGAGGCTCTCAAACTGAAGGCGCCATGTTCTCATCACAATTGCTCATTTGGTGGGGTATGGGACGGTGGAAGAGGAAGTGGACAAAGAATTATTTATGCTACTTCATCCTTCTATTATCTGTCCAGAGACGTTGGTATCGTTGATCAAAAATCTCCCAATGCCATTGTTCGTCCTGTGGATCTTGAAAACTTGGTTAAGGGAGCTTGTGGAAAAACATTTGAAGATGCCAAATCAAGTTATCCACTTCTTTCTGAAGAAAGAGTTCCGTTTGTGTGCATGGACATTACGTACATGTATATTGTTTTGTAG 606 0.4274 MAYAVSRNTAKNAPLLPQGEDPYIKKLYVKGKNYDLYVHSYLRYGTEAFRAEVLEVTDGSANPCILAGYEGSYTYSGVEYAVYPPKSGPNYDACREIVLEALKLKAPCSHHNCSFGGVWDGGRGSGQRIIYATSSFYYLSRDVGIVDQKSPNAIVRPVDLENLVKGACGKTFEDAKSSYPLLSEERVPFVCMDITYMYIVL 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2408g00002 201 Pfam GDA1/CD39 (nucleoside phosphatase) family 1 201 IPR000407 GO:0016787
Vium2408g00002 201 Gene3D Exopolyphosphatase. Domain 2 1 201 - -
Vium2408g00002 201 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 1 201 IPR000407 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2408g00002 Vium-Chr2408 19018 20047 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2408g00002 1 201 Calmodulin-binding Proteins AT3G04080 43.069 6.15e-50 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2408g00002 K14641 - var:108327508 323.939