Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2404g00002 ATGGATCGAGAAAATGGCGACGGTGACATTGAAGGCGGTGGCGGCGATGATGGTTTTCGCTCGGGCCGCAAGTATCGTCCTGTCTTGGCCAATGATCGCGCGGTACTCGAAATGTCTTCCATAGATCCGGGATCTACTTCTTCTTCCACTTCTGCTTTTACAGATATTCCTTCTAATCTCAGAAAAGTGAAAACTAGTCTTAGTGGGAGTTCGGATGCTAAAGAAGGCAACGCTTCTCATCAACAGCAACCTAATGGATCCCAGCAGCAGGAATCTAAATTGGAACTGTTCGGTTTTGACTCTCTTGTCAACATTCTTGGTCTCAAAAGTATGACTGGTGAGCAGGTTGCACAACCATCAAGTCCTAGAGATGGTGAGGATATATCTATCACTGCTGGCTTGCCAAAGCCTGCTGCTCCCAAACTTGGTACATTGATGGGTGTATTTATTCCATGTATTCAAAGCATTTTGGGCATCATCTACTACATTCGTTTCTCTTGGATTGTTGGCATGGCTGGCATAGGACAAACATTGTTGCTTGTTTCTTTATGTGGCACCTGTACATTCCTTACTTCAATATCATTGAGTGCTATTGCAACCAATGGTGCCATGAAGGGTGGGGGACCTTACTATCTAATAGGTCGAGCCCTTGGTCCTGAAGTTGGAGTTAGCATTGGTCTATGCTTCTTCCTTGGAAATGCTGTTGCTGGAGCACTTTATGTATTGGGAGCTGTAGAAACATTTTTGAAAGCAGTTCCTGCTGCTGGGATCTTTAGAGTGCAGAGGCTGCCACACAAGTTAACGGGACTGCAGTTACACAACCAATAG 828 0.4529 MDRENGDGDIEGGGGDDGFRSGRKYRPVLANDRAVLEMSSIDPGSTSSSTSAFTDIPSNLRKVKTSLSGSSDAKEGNASHQQQPNGSQQQESKLELFGFDSLVNILGLKSMTGEQVAQPSSPRDGEDISITAGLPKPAAPKLGTLMGVFIPCIQSILGIIYYIRFSWIVGMAGIGQTLLLVSLCGTCTFLTSISLSAIATNGAMKGGGPYYLIGRALGPEVGVSIGLCFFLGNAVAGALYVLGAVETFLKAVPAAGIFRVQRLPHKLTGLQLHNQ 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2404g00002 275 MobiDBLite consensus disorder prediction 38 91 - -
Vium2404g00002 275 Pfam Amino acid permease 147 253 IPR004841 GO:0016020|GO:0055085
Vium2404g00002 275 MobiDBLite consensus disorder prediction 40 91 - -
Vium2404g00002 275 MobiDBLite consensus disorder prediction 1 25 - -
Vium2404g00002 275 Gene3D Amino acid/polyamine transporter I 140 270 - -
Vium2404g00002 275 PANTHER SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS 79 252 IPR004842 GO:0006811|GO:0015377|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2404g00002 Vium-Chr2404 4268 11854 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2404g00002 142 259 Inorganic Solute Cotransporters AT1G30450 88.983 8.82e-67 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2404g00002 K14427 - vum:124830422 468.003