Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium2402g00027 ATGGAAGAAATTGAAGGGGTGGATTGTTGCAGTAAAAGTGAAAGCAGGAGCTCTAGTGGGACTCGACCTCCCAATCCCAACCCACCTTCACATCGCCAATGCAAACTTGTTCGCCACGCTTCTCTCATGAAAACAAATTTGTCTGATGTATCTGAGCCAGGGGATGTTACCGAAGATTGCCAGTCTGATTTCTTTCCAACGCTTCGTTCTGGAGCTTGCGCTGATATTGGATTTCGGTCAAGTATGGAAGATGTATATGTTTGTGTTGACAATTTTATGCACGATTATGGACTCAAGAATTGTATAGATGGACCCAGTGCTTTCTATGGGGTGTTTGATGGACATGGAGGAAAGCATGCCGCTGACTTTGCTTGCCAGCATCTGCCGAAGTTTATTCTCGATGACGAAGATTTCCCCGGAGACATTGAAAGGATAGTTGCTTCGGCATTTCTGCAAACAGACAATGCATTTGCAGAAGCTTGCTCTCTGGATGGTGCACTTGCATCAGGCACCACTGCATTAGCTACTCTTGTTATAGGAAGGTTGTTGGTGGTGGCAAATGCTGGAGATTGTCGAGCTGTGCTGTGCCGTCGTGGGAAAGCAATTGAAATGTCAAGAGATCATAAACCGAGTTGCAACAAAGAAAGGAAGCGAATAGAGGCTTCTGGGGGGTATGTGTACGATGGATATCTTAACGGGCAACTGAATGTTGCTCGAGCACTTGGTGACTGGCACATGGAAGGAATGAAGAGCAAAGATGGTGGACCACTGACTTCAGAACCCGAACTTATGAGTACAAAACTGACGAGCGAGGACGAATTTCTGATCATAGGATGTGATGGGATTTGGGATGTATTCAGGAGCCAAAATGCAGTGGATTTCGCCAGGCGCAGGCTCCAGGAGCATAATGACCCAACCTTGTGCAGTAAGGATCTGGTTGATGAGGCTTTAAAGAGAAAGAGTGGAGACAATTTGTCTGCAGTTGTGATTTGCTTCCAGCAGCAACTTCCTTGCAACTTAGTGGCCCCTCGCTCTAGAGTGCACCGGAGCTTCTCTGCTGAAGGTTTGAAGGAGTTGCAGAGTTTCCTGGATAGCTTGGGTAATTGA 1107 0.467 MEEIEGVDCCSKSESRSSSGTRPPNPNPPSHRQCKLVRHASLMKTNLSDVSEPGDVTEDCQSDFFPTLRSGACADIGFRSSMEDVYVCVDNFMHDYGLKNCIDGPSAFYGVFDGHGGKHAADFACQHLPKFILDDEDFPGDIERIVASAFLQTDNAFAEACSLDGALASGTTALATLVIGRLLVVANAGDCRAVLCRRGKAIEMSRDHKPSCNKERKRIEASGGYVYDGYLNGQLNVARALGDWHMEGMKSKDGGPLTSEPELMSTKLTSEDEFLIIGCDGIWDVFRSQNAVDFARRRLQEHNDPTLCSKDLVDEALKRKSGDNLSAVVICFQQQLPCNLVAPRSRVHRSFSAEGLKELQSFLDSLGN 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium2402g00027 368 SMART PP2C_4 59 330 IPR001932 -
Vium2402g00027 368 MobiDBLite consensus disorder prediction 1 33 - -
Vium2402g00027 368 CDD PP2Cc 69 332 IPR001932 -
Vium2402g00027 368 Pfam Protein phosphatase 2C 71 324 IPR001932 -
Vium2402g00027 368 ProSiteProfiles PPM-type phosphatase domain profile. 69 332 IPR001932 -
Vium2402g00027 368 ProSitePatterns PPM-type phosphatase domain signature. 108 116 IPR000222 GO:0043169
Vium2402g00027 368 FunFam Probable protein phosphatase 2C 22 54 335 - -
Vium2402g00027 368 SUPERFAMILY PP2C-like 64 333 IPR036457 -
Vium2402g00027 368 Gene3D - 49 337 IPR036457 -
Vium2402g00027 368 PANTHER PROTEIN PHOSPHATASE 2C 43 330 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium2402g00027 Vium-Chr2402 133904 136822 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium2402g00027 1 368 PP2C-type Phosphatase Gene Family AT2G25620 66.582 0.0 521
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium2402g00027 K14803 - gmx:100815725 674.855